Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.84■□□□□ 0.29
SPCS3P61009 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS3P61009 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.84■□□□□ 0.29
SPCS3P61009 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SPCS3P61009 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
SPCS3P61009 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS3P61009 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.84■□□□□ 0.29
SPCS3P61009 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.84■□□□□ 0.29
SPCS3P61009 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS3P61009 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS3P61009 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS3P61009 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.84■□□□□ 0.29
SPCS3P61009 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS3P61009 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS3P61009 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS3P61009 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS3P61009 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS3P61009 GABARAPL3-202ENST00000624044 1851 ntBASIC16.84■□□□□ 0.29
SPCS3P61009 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS3P61009 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS3P61009 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SPCS3P61009 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SPCS3P61009 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS3P61009 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
SPCS3P61009 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SPCS3P61009 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPCS3P61009 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
SPCS3P61009 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.83■□□□□ 0.28
SPCS3P61009 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SPCS3P61009 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPCS3P61009 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SPCS3P61009 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.83■□□□□ 0.28
SPCS3P61009 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.83■□□□□ 0.28
SPCS3P61009 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.83■□□□□ 0.28
SPCS3P61009 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SPCS3P61009 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
SPCS3P61009 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPCS3P61009 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPCS3P61009 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPCS3P61009 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.82■□□□□ 0.28
SPCS3P61009 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPCS3P61009 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPCS3P61009 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SPCS3P61009 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPCS3P61009 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SPCS3P61009 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPCS3P61009 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.82■□□□□ 0.28
SPCS3P61009 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.82■□□□□ 0.28
SPCS3P61009 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.82■□□□□ 0.28
SPCS3P61009 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.82■□□□□ 0.28
SPCS3P61009 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
SPCS3P61009 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.82■□□□□ 0.28
SPCS3P61009 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPCS3P61009 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.82■□□□□ 0.28
SPCS3P61009 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.82■□□□□ 0.28
SPCS3P61009 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.82■□□□□ 0.28
SPCS3P61009 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPCS3P61009 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPCS3P61009 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SPCS3P61009 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SPCS3P61009 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPCS3P61009 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SPCS3P61009 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SPCS3P61009 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.81■□□□□ 0.28
SPCS3P61009 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SPCS3P61009 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.81■□□□□ 0.28
SPCS3P61009 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SPCS3P61009 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.81■□□□□ 0.28
SPCS3P61009 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPCS3P61009 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPCS3P61009 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.81■□□□□ 0.28
SPCS3P61009 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.81■□□□□ 0.28
SPCS3P61009 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.81■□□□□ 0.28
SPCS3P61009 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.81■□□□□ 0.28
SPCS3P61009 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPCS3P61009 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPCS3P61009 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPCS3P61009 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SPCS3P61009 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 PLK5-205ENST00000642079 1969 ntBASIC16.8■□□□□ 0.28
SPCS3P61009 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SPCS3P61009 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SPCS3P61009 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
SPCS3P61009 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
SPCS3P61009 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
SPCS3P61009 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.8■□□□□ 0.28
SPCS3P61009 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.8■□□□□ 0.28
SPCS3P61009 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.8■□□□□ 0.28
SPCS3P61009 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.8■□□□□ 0.28
SPCS3P61009 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SPCS3P61009 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
SPCS3P61009 SMUG1P1-201ENST00000590640 811 ntBASIC16.8■□□□□ 0.28
SPCS3P61009 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SPCS3P61009 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SPCS3P61009 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPCS3P61009 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms