Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF144AP50876 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RNF144AP50876 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF144AP50876 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF144AP50876 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RNF144AP50876 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF144AP50876 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF144AP50876 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF144AP50876 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF144AP50876 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RNF144AP50876 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RNF144AP50876 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RNF144AP50876 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RNF144AP50876 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF144AP50876 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF144AP50876 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF144AP50876 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF144AP50876 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF144AP50876 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF144AP50876 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF144AP50876 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RNF144AP50876 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF144AP50876 AL157384.1-201ENST00000445995 2473 ntBASIC19.26■□□□□ 0.67
RNF144AP50876 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RNF144AP50876 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF144AP50876 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF144AP50876 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF144AP50876 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RNF144AP50876 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF144AP50876 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.26■□□□□ 0.67
RNF144AP50876 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.26■□□□□ 0.67
RNF144AP50876 AC053503.5-201ENST00000601508 636 ntBASIC19.26■□□□□ 0.67
RNF144AP50876 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF144AP50876 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF144AP50876 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF144AP50876 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF144AP50876 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF144AP50876 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF144AP50876 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
RNF144AP50876 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF144AP50876 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF144AP50876 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RNF144AP50876 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF144AP50876 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF144AP50876 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF144AP50876 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF144AP50876 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF144AP50876 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF144AP50876 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF144AP50876 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF144AP50876 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF144AP50876 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RNF144AP50876 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RNF144AP50876 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF144AP50876 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF144AP50876 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF144AP50876 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.25■□□□□ 0.67
RNF144AP50876 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF144AP50876 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF144AP50876 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RNF144AP50876 AC073130.3-201ENST00000624389 2278 ntBASIC19.25■□□□□ 0.67
RNF144AP50876 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF144AP50876 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF144AP50876 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF144AP50876 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF144AP50876 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF144AP50876 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RNF144AP50876 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.24■□□□□ 0.67
RNF144AP50876 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF144AP50876 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF144AP50876 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.24■□□□□ 0.67
RNF144AP50876 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF144AP50876 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF144AP50876 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF144AP50876 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF144AP50876 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RNF144AP50876 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF144AP50876 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF144AP50876 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF144AP50876 AP004607.4-201ENST00000530158 1459 ntBASIC19.23■□□□□ 0.67
RNF144AP50876 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RNF144AP50876 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF144AP50876 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RNF144AP50876 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
RNF144AP50876 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF144AP50876 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF144AP50876 SLC7A5P2-201ENST00000553010 536 ntBASIC19.23■□□□□ 0.67
RNF144AP50876 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF144AP50876 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF144AP50876 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RNF144AP50876 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF144AP50876 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF144AP50876 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF144AP50876 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF144AP50876 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF144AP50876 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF144AP50876 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RNF144AP50876 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RNF144AP50876 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF144AP50876 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms