Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LHX2P50458 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.63■□□□□ 0.57
LHX2P50458 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
LHX2P50458 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX2P50458 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX2P50458 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX2P50458 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX2P50458 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LHX2P50458 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LHX2P50458 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LHX2P50458 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LHX2P50458 AC010980.2-201ENST00000587099 1412 ntBASIC18.62■□□□□ 0.57
LHX2P50458 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX2P50458 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
LHX2P50458 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.62■□□□□ 0.57
LHX2P50458 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.62■□□□□ 0.57
LHX2P50458 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.62■□□□□ 0.57
LHX2P50458 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX2P50458 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LHX2P50458 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX2P50458 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX2P50458 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX2P50458 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX2P50458 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX2P50458 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX2P50458 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX2P50458 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX2P50458 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX2P50458 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.61■□□□□ 0.57
LHX2P50458 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.61■□□□□ 0.57
LHX2P50458 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX2P50458 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.61■□□□□ 0.57
LHX2P50458 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX2P50458 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
LHX2P50458 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LHX2P50458 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.61■□□□□ 0.57
LHX2P50458 MIPEPP3-201ENST00000412105 444 ntBASIC18.61■□□□□ 0.57
LHX2P50458 AC007322.3-201ENST00000426526 701 ntBASIC18.61■□□□□ 0.57
LHX2P50458 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.61■□□□□ 0.57
LHX2P50458 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LHX2P50458 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.61■□□□□ 0.57
LHX2P50458 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.61■□□□□ 0.57
LHX2P50458 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.61■□□□□ 0.57
LHX2P50458 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX2P50458 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX2P50458 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LHX2P50458 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.61■□□□□ 0.57
LHX2P50458 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.61■□□□□ 0.57
LHX2P50458 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LHX2P50458 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX2P50458 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.6■□□□□ 0.57
LHX2P50458 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.6■□□□□ 0.57
LHX2P50458 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX2P50458 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.6■□□□□ 0.57
LHX2P50458 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX2P50458 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LHX2P50458 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.6■□□□□ 0.57
LHX2P50458 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX2P50458 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LHX2P50458 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.6■□□□□ 0.57
LHX2P50458 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.6■□□□□ 0.57
LHX2P50458 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LHX2P50458 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.6■□□□□ 0.57
LHX2P50458 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX2P50458 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LHX2P50458 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX2P50458 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.6■□□□□ 0.57
LHX2P50458 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX2P50458 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LHX2P50458 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LHX2P50458 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LHX2P50458 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LHX2P50458 AC073210.2-201ENST00000430369 194 ntBASIC18.59■□□□□ 0.57
LHX2P50458 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.59■□□□□ 0.57
LHX2P50458 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.59■□□□□ 0.57
LHX2P50458 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.59■□□□□ 0.57
LHX2P50458 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.59■□□□□ 0.57
LHX2P50458 AC116050.2-201ENST00000612102 1779 ntBASIC18.59■□□□□ 0.57
LHX2P50458 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LHX2P50458 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LHX2P50458 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LHX2P50458 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LHX2P50458 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LHX2P50458 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.59■□□□□ 0.57
LHX2P50458 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LHX2P50458 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
LHX2P50458 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.58■□□□□ 0.57
LHX2P50458 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.58■□□□□ 0.57
LHX2P50458 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.58■□□□□ 0.57
LHX2P50458 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LHX2P50458 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LHX2P50458 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.58■□□□□ 0.57
LHX2P50458 BX276092.2-201ENST00000417668 665 ntBASIC18.58■□□□□ 0.56
LHX2P50458 AC069152.1-201ENST00000438030 544 ntBASIC18.58■□□□□ 0.56
LHX2P50458 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.58■□□□□ 0.56
LHX2P50458 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.58■□□□□ 0.56
LHX2P50458 AC098934.4-201ENST00000564127 592 ntBASIC18.58■□□□□ 0.56
LHX2P50458 MIR4758-201ENST00000577688 71 ntBASIC18.58■□□□□ 0.56
LHX2P50458 AC100791.3-201ENST00000617619 330 ntBASIC18.58■□□□□ 0.56
LHX2P50458 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms