Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.46□□□□□ -0.09
PCP4P48539 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.46□□□□□ -0.09
PCP4P48539 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.46□□□□□ -0.09
PCP4P48539 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCP4P48539 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.46□□□□□ -0.09
PCP4P48539 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCP4P48539 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCP4P48539 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PCP4P48539 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCP4P48539 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCP4P48539 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.46□□□□□ -0.09
PCP4P48539 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCP4P48539 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.46□□□□□ -0.09
PCP4P48539 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCP4P48539 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PCP4P48539 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
PCP4P48539 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
PCP4P48539 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCP4P48539 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCP4P48539 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PCP4P48539 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PCP4P48539 AP005212.1-201ENST00000581547 1997 ntBASIC14.45□□□□□ -0.1
PCP4P48539 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCP4P48539 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCP4P48539 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCP4P48539 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCP4P48539 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCP4P48539 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PCP4P48539 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PCP4P48539 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCP4P48539 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCP4P48539 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCP4P48539 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCP4P48539 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PCP4P48539 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCP4P48539 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCP4P48539 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCP4P48539 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCP4P48539 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCP4P48539 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PCP4P48539 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCP4P48539 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
PCP4P48539 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PCP4P48539 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PCP4P48539 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.44□□□□□ -0.1
PCP4P48539 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.44□□□□□ -0.1
PCP4P48539 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.44□□□□□ -0.1
PCP4P48539 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PCP4P48539 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.44□□□□□ -0.1
PCP4P48539 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PCP4P48539 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.44□□□□□ -0.1
PCP4P48539 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.44□□□□□ -0.1
PCP4P48539 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.44□□□□□ -0.1
PCP4P48539 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCP4P48539 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCP4P48539 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
PCP4P48539 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCP4P48539 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.43□□□□□ -0.1
PCP4P48539 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PCP4P48539 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
PCP4P48539 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCP4P48539 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCP4P48539 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCP4P48539 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.43□□□□□ -0.1
PCP4P48539 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCP4P48539 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.43□□□□□ -0.1
PCP4P48539 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCP4P48539 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PCP4P48539 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PCP4P48539 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCP4P48539 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCP4P48539 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.43□□□□□ -0.1
PCP4P48539 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.43□□□□□ -0.1
PCP4P48539 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PCP4P48539 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PCP4P48539 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCP4P48539 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCP4P48539 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCP4P48539 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.43□□□□□ -0.1
PCP4P48539 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCP4P48539 AL353803.4-201ENST00000565882 1934 ntBASIC14.43□□□□□ -0.1
PCP4P48539 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCP4P48539 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCP4P48539 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms