Protein–RNA interactions for Protein: P47100

TY1B-JR2, Transposon Ty1-JR2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR2P47100 ALG11YNL048W 1647 nt1.75□□□□□ -2.13
TY1B-JR2P47100 BEM2YER155C 6504 nt1.75□□□□□ -2.13
TY1B-JR2P47100 YDL073WYDL073W 2955 nt1.75□□□□□ -2.13
TY1B-JR2P47100 PRP38YGR075C 729 nt1.75□□□□□ -2.13
TY1B-JR2P47100 SPP382YLR424W 2127 nt1.75□□□□□ -2.13
TY1B-JR2P47100 TRM112YNR046W 408 nt1.75□□□□□ -2.13
TY1B-JR2P47100 PRM2YIL037C 1971 nt1.74□□□□□ -2.13
TY1B-JR2P47100 ISW2YOR304W 3363 nt1.74□□□□□ -2.13
TY1B-JR2P47100 YER067C-AYER067C-A 324 nt1.74□□□□□ -2.13
TY1B-JR2P47100 PRP18YGR006W 756 nt1.74□□□□□ -2.13
TY1B-JR2P47100 SPO13YHR014W 876 nt1.74□□□□□ -2.13
TY1B-JR2P47100 HIT1YJR055W 495 nt1.74□□□□□ -2.13
TY1B-JR2P47100 KEI1YDR367W 666 nt1.73□□□□□ -2.13
TY1B-JR2P47100 SUR1YPL057C 1149 nt1.73□□□□□ -2.13
TY1B-JR2P47100 YBR089WYBR089W 600 nt1.73□□□□□ -2.13
TY1B-JR2P47100 MES1YGR264C 2256 nt1.73□□□□□ -2.13
TY1B-JR2P47100 RIF1YBR275C 5751 nt1.73□□□□□ -2.13
TY1B-JR2P47100 BDP1YNL039W 1785 nt1.73□□□□□ -2.13
TY1B-JR2P47100 YER085CYER085C 522 nt1.72□□□□□ -2.13
TY1B-JR2P47100 VMA10YHR039C-A 345 nt1.72□□□□□ -2.13
TY1B-JR2P47100 tV(UAC)BtV(UAC)B 74 nt1.72□□□□□ -2.13
TY1B-JR2P47100 tV(UAC)DtV(UAC)D 74 nt1.72□□□□□ -2.13
TY1B-JR2P47100 SPC3YLR066W 555 nt1.72□□□□□ -2.13
TY1B-JR2P47100 NPR1YNL183C 2373 nt1.72□□□□□ -2.13
TY1B-JR2P47100 HMLALPHA1YCL066W 528 nt1.71□□□□□ -2.14
TY1B-JR2P47100 MATALPHA1YCR040W 528 nt1.71□□□□□ -2.14
TY1B-JR2P47100 IPT1YDR072C 1584 nt1.71□□□□□ -2.14
TY1B-JR2P47100 TIM9YEL020W-A 264 nt1.71□□□□□ -2.14
TY1B-JR2P47100 YGL069CYGL069C 465 nt1.71□□□□□ -2.14
TY1B-JR2P47100 VHR1YIL056W 1923 nt1.71□□□□□ -2.14
TY1B-JR2P47100 CDC25YLR310C 4770 nt1.7□□□□□ -2.14
TY1B-JR2P47100 RIX1YHR197W 2292 nt1.7□□□□□ -2.14
TY1B-JR2P47100 RRP42YDL111C 798 nt1.7□□□□□ -2.14
TY1B-JR2P47100 YOL162WYOL162W 648 nt1.7□□□□□ -2.14
TY1B-JR2P47100 YIL166CYIL166C 1629 nt1.7□□□□□ -2.14
TY1B-JR2P47100 YEL1YBL060W 2064 nt1.7□□□□□ -2.14
TY1B-JR2P47100 YPK3YBR028C 1578 nt1.7□□□□□ -2.14
TY1B-JR2P47100 HFM1YGL251C 3564 nt1.7□□□□□ -2.14
TY1B-JR2P47100 SLM4YBR077C 489 nt1.7□□□□□ -2.14
TY1B-JR2P47100 OST5YGL226C-A 261 nt1.69□□□□□ -2.14
TY1B-JR2P47100 RRP8YDR083W 1179 nt1.68□□□□□ -2.14
TY1B-JR2P47100 YGL117WYGL117W 798 nt1.68□□□□□ -2.14
TY1B-JR2P47100 HCH1YNL281W 462 nt1.68□□□□□ -2.14
TY1B-JR2P47100 ALE1YOR175C 1860 nt1.68□□□□□ -2.14
TY1B-JR2P47100 RPN5YDL147W 1338 nt1.67□□□□□ -2.14
TY1B-JR2P47100 PUF2YPR042C 3228 nt1.67□□□□□ -2.14
TY1B-JR2P47100 SPE1YKL184W 1401 nt1.67□□□□□ -2.14
TY1B-JR2P47100 DFG16YOR030W 1860 nt1.67□□□□□ -2.14
TY1B-JR2P47100 RAV2YDR202C 1056 nt1.67□□□□□ -2.14
TY1B-JR2P47100 MIG2YGL209W 1149 nt1.67□□□□□ -2.14
TY1B-JR2P47100 PPE1YHR075C 1203 nt1.67□□□□□ -2.14
TY1B-JR2P47100 CBP6YBR120C 489 nt1.67□□□□□ -2.14
TY1B-JR2P47100 ENP2YGR145W 2124 nt1.66□□□□□ -2.14
TY1B-JR2P47100 tT(UGU)HtT(UGU)H 72 nt1.66□□□□□ -2.14
TY1B-JR2P47100 PRP3YDR473C 1410 nt1.66□□□□□ -2.14
TY1B-JR2P47100 PET309YLR067C 2898 nt1.66□□□□□ -2.14
TY1B-JR2P47100 RTT105YER104W 627 nt1.65□□□□□ -2.14
TY1B-JR2P47100 YNL046WYNL046W 519 nt1.65□□□□□ -2.14
TY1B-JR2P47100 CTR86YCR054C 1692 nt1.65□□□□□ -2.15
TY1B-JR2P47100 SUB1YMR039C 879 nt1.64□□□□□ -2.15
TY1B-JR2P47100 MET18YIL128W 3099 nt1.64□□□□□ -2.15
TY1B-JR2P47100 YGR160WYGR160W 612 nt1.64□□□□□ -2.15
TY1B-JR2P47100 CDA2YLR308W 939 nt1.64□□□□□ -2.15
TY1B-JR2P47100 MCT1YOR221C 1083 nt1.64□□□□□ -2.15
TY1B-JR2P47100 YMR1YJR110W 2067 nt1.64□□□□□ -2.15
TY1B-JR2P47100 NOP56YLR197W 1515 nt1.63□□□□□ -2.15
TY1B-JR2P47100 PRP16YKR086W 3216 nt1.63□□□□□ -2.15
TY1B-JR2P47100 URB2YJR041C 3525 nt1.63□□□□□ -2.15
TY1B-JR2P47100 UTP6YDR449C 1323 nt1.63□□□□□ -2.15
TY1B-JR2P47100 HKR1YDR420W 5409 nt1.63□□□□□ -2.15
TY1B-JR2P47100 URC2YDR520C 2319 nt1.63□□□□□ -2.15
TY1B-JR2P47100 FMP16YDR070C 282 nt1.63□□□□□ -2.15
TY1B-JR2P47100 RPS0BYLR048W 759 nt1.63□□□□□ -2.15
TY1B-JR2P47100 YJL070CYJL070C 2667 nt1.63□□□□□ -2.15
TY1B-JR2P47100 IST2YBR086C 2841 nt1.63□□□□□ -2.15
TY1B-JR2P47100 REV7YIL139C 738 nt1.62□□□□□ -2.15
TY1B-JR2P47100 INP1YMR204C 1263 nt1.62□□□□□ -2.15
TY1B-JR2P47100 YNL203CYNL203C 612 nt1.62□□□□□ -2.15
TY1B-JR2P47100 YPL071CYPL071C 471 nt1.62□□□□□ -2.15
TY1B-JR2P47100 YBR255C-AYBR255C-A 363 nt1.62□□□□□ -2.15
TY1B-JR2P47100 SRO9YCL037C 1305 nt1.62□□□□□ -2.15
TY1B-JR2P47100 YDR461C-AYDR461C-A 243 nt1.62□□□□□ -2.15
TY1B-JR2P47100 YHR097CYHR097C 1101 nt1.62□□□□□ -2.15
TY1B-JR2P47100 YMR086C-AYMR086C-A 339 nt1.62□□□□□ -2.15
TY1B-JR2P47100 UBP16YPL072W 1500 nt1.62□□□□□ -2.15
TY1B-JR2P47100 RKM1YPL208W 1752 nt1.61□□□□□ -2.15
TY1B-JR2P47100 MAD1YGL086W 2250 nt1.61□□□□□ -2.15
TY1B-JR2P47100 DIA2YOR080W 2199 nt1.61□□□□□ -2.15
TY1B-JR2P47100 YDR115WYDR115W 318 nt1.61□□□□□ -2.15
TY1B-JR2P47100 HTD2YHR067W 843 nt1.61□□□□□ -2.15
TY1B-JR2P47100 FMC1YIL098C 468 nt1.61□□□□□ -2.15
TY1B-JR2P47100 MSL1YIR009W 336 nt1.61□□□□□ -2.15
TY1B-JR2P47100 PAM16YJL104W 450 nt1.61□□□□□ -2.15
TY1B-JR2P47100 NDJ1YOL104C 1059 nt1.61□□□□□ -2.15
TY1B-JR2P47100 SVS1YPL163C 783 nt1.61□□□□□ -2.15
TY1B-JR2P47100 MYO2YOR326W 4725 nt1.6□□□□□ -2.15
TY1B-JR2P47100 YNL228WYNL228W 777 nt1.6□□□□□ -2.15
TY1B-JR2P47100 YGR242WYGR242W 309 nt1.59□□□□□ -2.15
TY1B-JR2P47100 RLP24YLR009W 600 nt1.59□□□□□ -2.15
TY1B-JR2P47100 YSP1YHR155W 3687 nt1.59□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 30.1 ms