Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
KDM5CP41229 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
KDM5CP41229 KRT18P21-201ENST00000515767 1272 ntBASIC31.47■■■□□ 2.63
KDM5CP41229 MTDHP1-201ENST00000605323 784 ntBASIC31.47■■■□□ 2.63
KDM5CP41229 AL049637.2-201ENST00000641778 930 ntBASIC31.47■■■□□ 2.63
KDM5CP41229 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC31.47■■■□□ 2.63
KDM5CP41229 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
KDM5CP41229 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC31.47■■■□□ 2.63
KDM5CP41229 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
KDM5CP41229 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
KDM5CP41229 RCN1P1-201ENST00000400413 996 ntBASIC31.47■■■□□ 2.63
KDM5CP41229 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC31.47■■■□□ 2.63
KDM5CP41229 REXO2-208ENST00000539754 791 ntTSL 2 BASIC31.47■■■□□ 2.63
KDM5CP41229 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
KDM5CP41229 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
KDM5CP41229 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
KDM5CP41229 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
KDM5CP41229 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
KDM5CP41229 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
KDM5CP41229 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
KDM5CP41229 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
KDM5CP41229 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
KDM5CP41229 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
KDM5CP41229 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
KDM5CP41229 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
KDM5CP41229 KRT18P68-201ENST00000392293 1000 ntBASIC31.46■■■□□ 2.63
KDM5CP41229 AC087499.1-201ENST00000418141 1075 ntBASIC31.46■■■□□ 2.63
KDM5CP41229 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
KDM5CP41229 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC31.46■■■□□ 2.63
KDM5CP41229 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
KDM5CP41229 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
KDM5CP41229 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
KDM5CP41229 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
KDM5CP41229 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
KDM5CP41229 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC31.45■■■□□ 2.63
KDM5CP41229 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
KDM5CP41229 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC31.45■■■□□ 2.63
KDM5CP41229 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC31.45■■■□□ 2.63
KDM5CP41229 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC31.45■■■□□ 2.62
KDM5CP41229 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
KDM5CP41229 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
KDM5CP41229 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
KDM5CP41229 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
KDM5CP41229 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
KDM5CP41229 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC31.44■■■□□ 2.62
KDM5CP41229 PPOX-219ENST00000544598 813 ntTSL 2 BASIC31.44■■■□□ 2.62
KDM5CP41229 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
KDM5CP41229 AC097493.4-201ENST00000641197 219 ntBASIC31.44■■■□□ 2.62
KDM5CP41229 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
KDM5CP41229 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
KDM5CP41229 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC31.44■■■□□ 2.62
KDM5CP41229 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
KDM5CP41229 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
KDM5CP41229 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
KDM5CP41229 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
KDM5CP41229 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
KDM5CP41229 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC31.43■■■□□ 2.62
KDM5CP41229 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC31.43■■■□□ 2.62
KDM5CP41229 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
KDM5CP41229 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC31.43■■■□□ 2.62
KDM5CP41229 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
KDM5CP41229 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC31.43■■■□□ 2.62
KDM5CP41229 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
KDM5CP41229 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC31.43■■■□□ 2.62
KDM5CP41229 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC31.43■■■□□ 2.62
KDM5CP41229 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
KDM5CP41229 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC31.43■■■□□ 2.62
KDM5CP41229 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC31.43■■■□□ 2.62
KDM5CP41229 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC31.43■■■□□ 2.62
KDM5CP41229 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC31.43■■■□□ 2.62
KDM5CP41229 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
KDM5CP41229 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC31.43■■■□□ 2.62
KDM5CP41229 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
KDM5CP41229 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
KDM5CP41229 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
KDM5CP41229 NFE2L3P1-201ENST00000588207 1959 ntBASIC31.42■■■□□ 2.62
KDM5CP41229 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
KDM5CP41229 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC31.42■■■□□ 2.62
KDM5CP41229 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC31.42■■■□□ 2.62
KDM5CP41229 SNX21-213ENST00000614929 587 ntTSL 5 BASIC31.42■■■□□ 2.62
KDM5CP41229 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
KDM5CP41229 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
KDM5CP41229 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
KDM5CP41229 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
KDM5CP41229 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
KDM5CP41229 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
KDM5CP41229 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
KDM5CP41229 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC31.41■■■□□ 2.62
KDM5CP41229 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
KDM5CP41229 LY6E-205ENST00000519611 635 ntTSL 3 BASIC31.41■■■□□ 2.62
KDM5CP41229 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC31.41■■■□□ 2.62
KDM5CP41229 AL355075.4-201ENST00000554988 638 ntBASIC31.41■■■□□ 2.62
KDM5CP41229 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
KDM5CP41229 AC113410.3-201ENST00000623366 203 ntBASIC31.41■■■□□ 2.62
KDM5CP41229 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
KDM5CP41229 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC31.4■■■□□ 2.62
KDM5CP41229 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
KDM5CP41229 HES2-205ENST00000487437 968 ntTSL 3 BASIC31.4■■■□□ 2.62
KDM5CP41229 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC31.4■■■□□ 2.62
KDM5CP41229 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms