Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCK1P35558 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.81■■□□□ 1.08
PCK1P35558 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.81■■□□□ 1.08
PCK1P35558 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCK1P35558 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCK1P35558 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCK1P35558 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCK1P35558 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCK1P35558 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCK1P35558 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCK1P35558 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.81■■□□□ 1.08
PCK1P35558 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.81■■□□□ 1.08
PCK1P35558 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.81■■□□□ 1.08
PCK1P35558 CCDC92B-201ENST00000575506 885 ntBASIC21.81■■□□□ 1.08
PCK1P35558 AC008175.2-201ENST00000612840 297 ntBASIC21.81■■□□□ 1.08
PCK1P35558 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCK1P35558 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCK1P35558 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCK1P35558 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCK1P35558 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCK1P35558 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCK1P35558 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCK1P35558 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
PCK1P35558 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCK1P35558 AC073130.3-201ENST00000624389 2278 ntBASIC21.8■■□□□ 1.08
PCK1P35558 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCK1P35558 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCK1P35558 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.8■■□□□ 1.08
PCK1P35558 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCK1P35558 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.8■■□□□ 1.08
PCK1P35558 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PCK1P35558 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.8■■□□□ 1.08
PCK1P35558 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.8■■□□□ 1.08
PCK1P35558 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.8■■□□□ 1.08
PCK1P35558 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCK1P35558 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PCK1P35558 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PCK1P35558 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PCK1P35558 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCK1P35558 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCK1P35558 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCK1P35558 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCK1P35558 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCK1P35558 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCK1P35558 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.79■■□□□ 1.08
PCK1P35558 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.79■■□□□ 1.08
PCK1P35558 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.79■■□□□ 1.08
PCK1P35558 KRT18P14-201ENST00000534205 1250 ntBASIC21.79■■□□□ 1.08
PCK1P35558 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.79■■□□□ 1.08
PCK1P35558 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.79■■□□□ 1.08
PCK1P35558 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PCK1P35558 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCK1P35558 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCK1P35558 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCK1P35558 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCK1P35558 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCK1P35558 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.79■■□□□ 1.08
PCK1P35558 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PCK1P35558 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCK1P35558 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PCK1P35558 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.78■■□□□ 1.08
PCK1P35558 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.78■■□□□ 1.08
PCK1P35558 AC010141.2-201ENST00000452426 721 ntBASIC21.78■■□□□ 1.08
PCK1P35558 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.78■■□□□ 1.08
PCK1P35558 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCK1P35558 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.78■■□□□ 1.08
PCK1P35558 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PCK1P35558 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.78■■□□□ 1.08
PCK1P35558 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCK1P35558 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.78■■□□□ 1.08
PCK1P35558 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PCK1P35558 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCK1P35558 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCK1P35558 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCK1P35558 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.77■■□□□ 1.08
PCK1P35558 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCK1P35558 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCK1P35558 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.77■■□□□ 1.08
PCK1P35558 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCK1P35558 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCK1P35558 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.77■■□□□ 1.08
PCK1P35558 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.77■■□□□ 1.08
PCK1P35558 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCK1P35558 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCK1P35558 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
PCK1P35558 AC092667.1-201ENST00000434301 2586 ntBASIC21.77■■□□□ 1.08
PCK1P35558 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PCK1P35558 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PCK1P35558 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PCK1P35558 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCK1P35558 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PCK1P35558 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCK1P35558 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
PCK1P35558 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCK1P35558 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.76■■□□□ 1.07
PCK1P35558 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.76■■□□□ 1.07
PCK1P35558 AC104187.1-201ENST00000607510 612 ntBASIC21.76■■□□□ 1.07
PCK1P35558 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCK1P35558 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCK1P35558 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms