Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CKS2P33552 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CKS2P33552 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.27■□□□□ 0.04
CKS2P33552 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CKS2P33552 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CKS2P33552 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC15.27■□□□□ 0.04
CKS2P33552 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC15.27■□□□□ 0.04
CKS2P33552 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC15.27■□□□□ 0.04
CKS2P33552 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CKS2P33552 AL031602.1-201ENST00000633169 911 ntBASIC15.27■□□□□ 0.04
CKS2P33552 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.27■□□□□ 0.03
CKS2P33552 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CKS2P33552 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CKS2P33552 PLK5-205ENST00000642079 1969 ntBASIC15.27■□□□□ 0.03
CKS2P33552 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CKS2P33552 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CKS2P33552 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CKS2P33552 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CKS2P33552 AC020763.4-201ENST00000623414 4170 ntBASIC15.27■□□□□ 0.03
CKS2P33552 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CKS2P33552 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CKS2P33552 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CKS2P33552 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CKS2P33552 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CKS2P33552 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.26■□□□□ 0.03
CKS2P33552 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CKS2P33552 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CKS2P33552 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.26■□□□□ 0.03
CKS2P33552 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.26■□□□□ 0.03
CKS2P33552 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CKS2P33552 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CKS2P33552 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CKS2P33552 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CKS2P33552 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CKS2P33552 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CKS2P33552 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CKS2P33552 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CKS2P33552 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CKS2P33552 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CKS2P33552 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.26■□□□□ 0.03
CKS2P33552 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CKS2P33552 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.26■□□□□ 0.03
CKS2P33552 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.26■□□□□ 0.03
CKS2P33552 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.26■□□□□ 0.03
CKS2P33552 AL499627.2-201ENST00000606283 725 ntBASIC15.26■□□□□ 0.03
CKS2P33552 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CKS2P33552 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CKS2P33552 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.26■□□□□ 0.03
CKS2P33552 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CKS2P33552 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CKS2P33552 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CKS2P33552 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.26■□□□□ 0.03
CKS2P33552 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CKS2P33552 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CKS2P33552 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CKS2P33552 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CKS2P33552 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
CKS2P33552 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.25■□□□□ 0.03
CKS2P33552 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CKS2P33552 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CKS2P33552 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.25■□□□□ 0.03
CKS2P33552 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CKS2P33552 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC15.25■□□□□ 0.03
CKS2P33552 PVT1_1.1-201ENST00000615125 194 ntBASIC15.25■□□□□ 0.03
CKS2P33552 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.25■□□□□ 0.03
CKS2P33552 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CKS2P33552 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CKS2P33552 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CKS2P33552 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CKS2P33552 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CKS2P33552 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CKS2P33552 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.25■□□□□ 0.03
CKS2P33552 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CKS2P33552 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.25■□□□□ 0.03
CKS2P33552 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CKS2P33552 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CKS2P33552 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CKS2P33552 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC15.24■□□□□ 0.03
CKS2P33552 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 AC027702.1-201ENST00000563810 1770 ntBASIC15.24■□□□□ 0.03
CKS2P33552 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.24■□□□□ 0.03
CKS2P33552 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.24■□□□□ 0.03
CKS2P33552 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC15.24■□□□□ 0.03
CKS2P33552 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CKS2P33552 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.24■□□□□ 0.03
CKS2P33552 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.24■□□□□ 0.03
CKS2P33552 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CKS2P33552 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms