Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.21■□□□□ 0.83
EPHA3P29320 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EPHA3P29320 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
EPHA3P29320 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
EPHA3P29320 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA3P29320 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.2■□□□□ 0.82
EPHA3P29320 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
EPHA3P29320 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
EPHA3P29320 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA3P29320 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA3P29320 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA3P29320 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA3P29320 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.2■□□□□ 0.82
EPHA3P29320 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.2■□□□□ 0.82
EPHA3P29320 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.2■□□□□ 0.82
EPHA3P29320 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.2■□□□□ 0.82
EPHA3P29320 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.2■□□□□ 0.82
EPHA3P29320 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA3P29320 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
EPHA3P29320 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA3P29320 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
EPHA3P29320 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA3P29320 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA3P29320 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.2■□□□□ 0.82
EPHA3P29320 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA3P29320 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA3P29320 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
EPHA3P29320 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA3P29320 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA3P29320 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA3P29320 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
EPHA3P29320 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.19■□□□□ 0.82
EPHA3P29320 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.19■□□□□ 0.82
EPHA3P29320 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA3P29320 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA3P29320 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.19■□□□□ 0.82
EPHA3P29320 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
EPHA3P29320 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.19■□□□□ 0.82
EPHA3P29320 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.19■□□□□ 0.82
EPHA3P29320 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA3P29320 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
EPHA3P29320 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA3P29320 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
EPHA3P29320 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA3P29320 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.19■□□□□ 0.82
EPHA3P29320 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA3P29320 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA3P29320 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
EPHA3P29320 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.19■□□□□ 0.82
EPHA3P29320 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.18■□□□□ 0.82
EPHA3P29320 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHA3P29320 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EPHA3P29320 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
EPHA3P29320 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EPHA3P29320 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHA3P29320 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.18■□□□□ 0.82
EPHA3P29320 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
EPHA3P29320 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
EPHA3P29320 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHA3P29320 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.18■□□□□ 0.82
EPHA3P29320 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHA3P29320 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHA3P29320 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.18■□□□□ 0.82
EPHA3P29320 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
EPHA3P29320 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHA3P29320 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
EPHA3P29320 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EPHA3P29320 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
EPHA3P29320 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
EPHA3P29320 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EPHA3P29320 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
EPHA3P29320 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.17■□□□□ 0.82
EPHA3P29320 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.17■□□□□ 0.82
EPHA3P29320 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EPHA3P29320 FP700111.2-201ENST00000619190 1892 ntBASIC20.17■□□□□ 0.82
EPHA3P29320 AL512408.1-201ENST00000569378 2000 ntBASIC20.17■□□□□ 0.82
EPHA3P29320 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
EPHA3P29320 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.17■□□□□ 0.82
EPHA3P29320 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
EPHA3P29320 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHA3P29320 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.16■□□□□ 0.82
EPHA3P29320 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHA3P29320 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
EPHA3P29320 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.16■□□□□ 0.82
EPHA3P29320 AC133561.4-201ENST00000566112 224 ntBASIC20.16■□□□□ 0.82
EPHA3P29320 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.16■□□□□ 0.82
EPHA3P29320 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EPHA3P29320 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHA3P29320 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.16■□□□□ 0.82
EPHA3P29320 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.16■□□□□ 0.82
EPHA3P29320 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.16■□□□□ 0.82
EPHA3P29320 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHA3P29320 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
EPHA3P29320 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
EPHA3P29320 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.15■□□□□ 0.82
EPHA3P29320 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
EPHA3P29320 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EPHA3P29320 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPHA3P29320 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.15■□□□□ 0.82
EPHA3P29320 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms