Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.97■□□□□ 0.95
XPAP23025 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
XPAP23025 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
XPAP23025 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.96■□□□□ 0.95
XPAP23025 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XPAP23025 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
XPAP23025 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
XPAP23025 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XPAP23025 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.96■□□□□ 0.95
XPAP23025 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XPAP23025 GPX1P1-201ENST00000388829 606 ntBASIC20.96■□□□□ 0.95
XPAP23025 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
XPAP23025 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.96■□□□□ 0.95
XPAP23025 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.96■□□□□ 0.95
XPAP23025 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
XPAP23025 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.96■□□□□ 0.95
XPAP23025 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XPAP23025 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
XPAP23025 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XPAP23025 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XPAP23025 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XPAP23025 HLA-L-209ENST00000420110 1011 ntBASIC20.95■□□□□ 0.94
XPAP23025 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
XPAP23025 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.95■□□□□ 0.94
XPAP23025 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
XPAP23025 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.95■□□□□ 0.94
XPAP23025 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
XPAP23025 AC069236.1-201ENST00000604339 616 ntBASIC20.95■□□□□ 0.94
XPAP23025 AL121832.2-201ENST00000610979 668 ntBASIC20.95■□□□□ 0.94
XPAP23025 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
XPAP23025 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XPAP23025 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XPAP23025 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
XPAP23025 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.95■□□□□ 0.94
XPAP23025 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XPAP23025 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.95■□□□□ 0.94
XPAP23025 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
XPAP23025 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.94■□□□□ 0.94
XPAP23025 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
XPAP23025 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
XPAP23025 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
XPAP23025 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
XPAP23025 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
XPAP23025 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.94■□□□□ 0.94
XPAP23025 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.94■□□□□ 0.94
XPAP23025 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
XPAP23025 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.94■□□□□ 0.94
XPAP23025 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
XPAP23025 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.94■□□□□ 0.94
XPAP23025 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
XPAP23025 AL591742.1-201ENST00000604433 565 ntBASIC20.94■□□□□ 0.94
XPAP23025 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.94■□□□□ 0.94
XPAP23025 AC244015.2-201ENST00000616358 1861 ntBASIC20.94■□□□□ 0.94
XPAP23025 AC068338.2-201ENST00000563278 1430 ntBASIC20.94■□□□□ 0.94
XPAP23025 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
XPAP23025 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
XPAP23025 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
XPAP23025 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XPAP23025 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XPAP23025 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
XPAP23025 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
XPAP23025 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XPAP23025 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
XPAP23025 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
XPAP23025 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.93■□□□□ 0.94
XPAP23025 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XPAP23025 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.93■□□□□ 0.94
XPAP23025 CYP2T1P-201ENST00000432607 1285 ntBASIC20.93■□□□□ 0.94
XPAP23025 NCF1B-203ENST00000435988 1254 ntBASIC20.93■□□□□ 0.94
XPAP23025 AL109923.1-201ENST00000618799 583 ntBASIC20.93■□□□□ 0.94
XPAP23025 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XPAP23025 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
XPAP23025 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XPAP23025 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.92■□□□□ 0.94
XPAP23025 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.92■□□□□ 0.94
XPAP23025 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XPAP23025 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
XPAP23025 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XPAP23025 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
XPAP23025 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
XPAP23025 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.92■□□□□ 0.94
XPAP23025 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.92■□□□□ 0.94
XPAP23025 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.92■□□□□ 0.94
XPAP23025 AC083906.2-201ENST00000511578 360 ntBASIC20.92■□□□□ 0.94
XPAP23025 AF201337.1-201ENST00000520239 748 ntBASIC20.92■□□□□ 0.94
XPAP23025 AL050303.2-201ENST00000619798 666 ntBASIC20.92■□□□□ 0.94
XPAP23025 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
XPAP23025 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
XPAP23025 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XPAP23025 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
XPAP23025 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XPAP23025 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
XPAP23025 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XPAP23025 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
XPAP23025 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
XPAP23025 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
XPAP23025 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
XPAP23025 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
XPAP23025 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
XPAP23025 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms