Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
KCNA3P22001 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC25.79■■□□□ 1.72
KCNA3P22001 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC25.79■■□□□ 1.72
KCNA3P22001 AC245052.3-201ENST00000450182 901 ntBASIC25.79■■□□□ 1.72
KCNA3P22001 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
KCNA3P22001 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
KCNA3P22001 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
KCNA3P22001 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC25.79■■□□□ 1.72
KCNA3P22001 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
KCNA3P22001 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
KCNA3P22001 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
KCNA3P22001 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
KCNA3P22001 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
KCNA3P22001 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.78■■□□□ 1.72
KCNA3P22001 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
KCNA3P22001 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.78■■□□□ 1.72
KCNA3P22001 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC25.78■■□□□ 1.72
KCNA3P22001 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.78■■□□□ 1.72
KCNA3P22001 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC25.78■■□□□ 1.72
KCNA3P22001 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC25.78■■□□□ 1.72
KCNA3P22001 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
KCNA3P22001 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
KCNA3P22001 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC25.78■■□□□ 1.72
KCNA3P22001 AL135905.2-201ENST00000584934 1404 ntBASIC25.78■■□□□ 1.72
KCNA3P22001 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
KCNA3P22001 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
KCNA3P22001 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
KCNA3P22001 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.77■■□□□ 1.72
KCNA3P22001 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
KCNA3P22001 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
KCNA3P22001 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.77■■□□□ 1.72
KCNA3P22001 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
KCNA3P22001 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.77■■□□□ 1.72
KCNA3P22001 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC25.77■■□□□ 1.72
KCNA3P22001 AC110285.5-201ENST00000611501 352 ntBASIC25.77■■□□□ 1.72
KCNA3P22001 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC25.77■■□□□ 1.72
KCNA3P22001 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
KCNA3P22001 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
KCNA3P22001 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
KCNA3P22001 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
KCNA3P22001 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC25.77■■□□□ 1.72
KCNA3P22001 CYP21A1P-202ENST00000354927 1481 ntBASIC25.77■■□□□ 1.72
KCNA3P22001 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
KCNA3P22001 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
KCNA3P22001 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
KCNA3P22001 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
KCNA3P22001 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
KCNA3P22001 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.76■■□□□ 1.72
KCNA3P22001 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
KCNA3P22001 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
KCNA3P22001 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC25.76■■□□□ 1.71
KCNA3P22001 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
KCNA3P22001 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
KCNA3P22001 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
KCNA3P22001 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
KCNA3P22001 HES2-205ENST00000487437 968 ntTSL 3 BASIC25.76■■□□□ 1.71
KCNA3P22001 PENK-204ENST00000518770 863 ntTSL 2 BASIC25.76■■□□□ 1.71
KCNA3P22001 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC25.76■■□□□ 1.71
KCNA3P22001 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
KCNA3P22001 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
KCNA3P22001 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
KCNA3P22001 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.76■■□□□ 1.71
KCNA3P22001 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC25.76■■□□□ 1.71
KCNA3P22001 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.76■■□□□ 1.71
KCNA3P22001 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
KCNA3P22001 AC139530.1-201ENST00000575312 1977 ntBASIC25.75■■□□□ 1.71
KCNA3P22001 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
KCNA3P22001 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
KCNA3P22001 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.75■■□□□ 1.71
KCNA3P22001 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC25.75■■□□□ 1.71
KCNA3P22001 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
KCNA3P22001 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC25.75■■□□□ 1.71
KCNA3P22001 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC25.75■■□□□ 1.71
KCNA3P22001 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC25.75■■□□□ 1.71
KCNA3P22001 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC25.75■■□□□ 1.71
KCNA3P22001 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
KCNA3P22001 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
KCNA3P22001 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
KCNA3P22001 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC25.74■■□□□ 1.71
KCNA3P22001 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.74■■□□□ 1.71
KCNA3P22001 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
KCNA3P22001 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC25.74■■□□□ 1.71
KCNA3P22001 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
KCNA3P22001 ARMC10P1-201ENST00000313754 855 ntBASIC25.74■■□□□ 1.71
KCNA3P22001 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
KCNA3P22001 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
KCNA3P22001 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
KCNA3P22001 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
KCNA3P22001 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC25.74■■□□□ 1.71
KCNA3P22001 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC25.74■■□□□ 1.71
KCNA3P22001 AC120498.8-201ENST00000614275 531 ntBASIC25.74■■□□□ 1.71
KCNA3P22001 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
KCNA3P22001 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
KCNA3P22001 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
KCNA3P22001 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
KCNA3P22001 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC25.73■■□□□ 1.71
KCNA3P22001 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
KCNA3P22001 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
KCNA3P22001 AC239809.2-201ENST00000415381 517 ntBASIC25.73■■□□□ 1.71
KCNA3P22001 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms