Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
NF1P21359 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.08■□□□□ 0.33
NF1P21359 AC006538.3-201ENST00000612495 578 ntBASIC17.08■□□□□ 0.33
NF1P21359 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
NF1P21359 LINC01960-201ENST00000563759 1884 ntBASIC17.08■□□□□ 0.33
NF1P21359 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NF1P21359 AL355472.2-201ENST00000422958 438 ntBASIC17.08■□□□□ 0.32
NF1P21359 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.08■□□□□ 0.32
NF1P21359 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
NF1P21359 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NF1P21359 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NF1P21359 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NF1P21359 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NF1P21359 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NF1P21359 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NF1P21359 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.07■□□□□ 0.32
NF1P21359 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NF1P21359 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.07■□□□□ 0.32
NF1P21359 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NF1P21359 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NF1P21359 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NF1P21359 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NF1P21359 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NF1P21359 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
NF1P21359 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NF1P21359 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.07■□□□□ 0.32
NF1P21359 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NF1P21359 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
NF1P21359 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.07■□□□□ 0.32
NF1P21359 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.06■□□□□ 0.32
NF1P21359 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NF1P21359 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NF1P21359 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.06■□□□□ 0.32
NF1P21359 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
NF1P21359 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
NF1P21359 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NF1P21359 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NF1P21359 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NF1P21359 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NF1P21359 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.06■□□□□ 0.32
NF1P21359 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
NF1P21359 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NF1P21359 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NF1P21359 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NF1P21359 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NF1P21359 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.06■□□□□ 0.32
NF1P21359 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.06■□□□□ 0.32
NF1P21359 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NF1P21359 AC105020.6-201ENST00000621523 1217 ntBASIC17.06■□□□□ 0.32
NF1P21359 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NF1P21359 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NF1P21359 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.05■□□□□ 0.32
NF1P21359 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NF1P21359 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NF1P21359 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.05■□□□□ 0.32
NF1P21359 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.05■□□□□ 0.32
NF1P21359 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.05■□□□□ 0.32
NF1P21359 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NF1P21359 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.05■□□□□ 0.32
NF1P21359 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NF1P21359 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NF1P21359 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NF1P21359 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NF1P21359 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.05■□□□□ 0.32
NF1P21359 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.05■□□□□ 0.32
NF1P21359 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NF1P21359 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NF1P21359 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NF1P21359 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NF1P21359 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.05■□□□□ 0.32
NF1P21359 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NF1P21359 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NF1P21359 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NF1P21359 AC104076.2-201ENST00000448912 469 ntBASIC17.04■□□□□ 0.32
NF1P21359 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.04■□□□□ 0.32
NF1P21359 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.04■□□□□ 0.32
NF1P21359 AL023875.1-201ENST00000640777 796 ntBASIC17.04■□□□□ 0.32
NF1P21359 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NF1P21359 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NF1P21359 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.04■□□□□ 0.32
NF1P21359 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NF1P21359 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NF1P21359 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.04■□□□□ 0.32
NF1P21359 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.04■□□□□ 0.32
NF1P21359 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.04■□□□□ 0.32
NF1P21359 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.04■□□□□ 0.32
NF1P21359 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.04■□□□□ 0.32
NF1P21359 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NF1P21359 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NF1P21359 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.03■□□□□ 0.32
NF1P21359 AC142381.3-201ENST00000568208 1670 ntBASIC17.03■□□□□ 0.32
NF1P21359 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NF1P21359 AL139125.2-201ENST00000623134 1869 ntBASIC17.03■□□□□ 0.32
NF1P21359 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NF1P21359 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NF1P21359 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NF1P21359 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NF1P21359 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.03■□□□□ 0.32
NF1P21359 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
NF1P21359 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms