Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC034268.1-201ENST00000441047 882 ntBASIC19.97■□□□□ 0.79
CAPN3P20807 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN3P20807 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.97■□□□□ 0.79
CAPN3P20807 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CAPN3P20807 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN3P20807 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CAPN3P20807 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.96■□□□□ 0.79
CAPN3P20807 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.96■□□□□ 0.79
CAPN3P20807 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.96■□□□□ 0.79
CAPN3P20807 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN3P20807 AC121338.2-201ENST00000622535 1744 ntBASIC19.96■□□□□ 0.79
CAPN3P20807 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN3P20807 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN3P20807 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN3P20807 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN3P20807 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN3P20807 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN3P20807 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN3P20807 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.96■□□□□ 0.79
CAPN3P20807 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN3P20807 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.96■□□□□ 0.79
CAPN3P20807 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CAPN3P20807 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.96■□□□□ 0.79
CAPN3P20807 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN3P20807 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.96■□□□□ 0.79
CAPN3P20807 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN3P20807 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.95■□□□□ 0.79
CAPN3P20807 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
CAPN3P20807 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.95■□□□□ 0.78
CAPN3P20807 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.95■□□□□ 0.78
CAPN3P20807 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN3P20807 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN3P20807 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CAPN3P20807 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.95■□□□□ 0.78
CAPN3P20807 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CAPN3P20807 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN3P20807 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CAPN3P20807 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CAPN3P20807 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CAPN3P20807 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.95■□□□□ 0.78
CAPN3P20807 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CAPN3P20807 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN3P20807 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.95■□□□□ 0.78
CAPN3P20807 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.95■□□□□ 0.78
CAPN3P20807 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.95■□□□□ 0.78
CAPN3P20807 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.95■□□□□ 0.78
CAPN3P20807 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.95■□□□□ 0.78
CAPN3P20807 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN3P20807 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN3P20807 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN3P20807 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN3P20807 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN3P20807 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN3P20807 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.95■□□□□ 0.78
CAPN3P20807 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN3P20807 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN3P20807 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN3P20807 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.94■□□□□ 0.78
CAPN3P20807 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN3P20807 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN3P20807 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.94■□□□□ 0.78
CAPN3P20807 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.94■□□□□ 0.78
CAPN3P20807 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN3P20807 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.94■□□□□ 0.78
CAPN3P20807 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN3P20807 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN3P20807 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN3P20807 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN3P20807 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN3P20807 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.93■□□□□ 0.78
CAPN3P20807 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
CAPN3P20807 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN3P20807 AFG3L1P-217ENST00000557444 2447 ntBASIC19.93■□□□□ 0.78
CAPN3P20807 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.93■□□□□ 0.78
CAPN3P20807 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN3P20807 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN3P20807 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.93■□□□□ 0.78
CAPN3P20807 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.93■□□□□ 0.78
CAPN3P20807 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.93■□□□□ 0.78
CAPN3P20807 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.93■□□□□ 0.78
CAPN3P20807 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN3P20807 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.93■□□□□ 0.78
CAPN3P20807 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN3P20807 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.93■□□□□ 0.78
CAPN3P20807 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CAPN3P20807 AC007225.1-201ENST00000566331 1836 ntBASIC19.92■□□□□ 0.78
CAPN3P20807 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN3P20807 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN3P20807 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN3P20807 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.92■□□□□ 0.78
CAPN3P20807 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.92■□□□□ 0.78
CAPN3P20807 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.92■□□□□ 0.78
CAPN3P20807 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.92■□□□□ 0.78
CAPN3P20807 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.92■□□□□ 0.78
CAPN3P20807 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.92■□□□□ 0.78
CAPN3P20807 AC022517.1-201ENST00000592429 346 ntBASIC19.92■□□□□ 0.78
CAPN3P20807 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.92■□□□□ 0.78
CAPN3P20807 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.92■□□□□ 0.78
CAPN3P20807 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CAPN3P20807 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms