Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3BP20337 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3BP20337 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3BP20337 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3BP20337 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RAB3BP20337 TSPY9P-201ENST00000440215 945 ntBASIC18.19■□□□□ 0.5
RAB3BP20337 TSPY11P-201ENST00000442607 1045 ntBASIC18.19■□□□□ 0.5
RAB3BP20337 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3BP20337 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB3BP20337 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RAB3BP20337 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RAB3BP20337 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3BP20337 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3BP20337 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3BP20337 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3BP20337 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3BP20337 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3BP20337 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3BP20337 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB3BP20337 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB3BP20337 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.18■□□□□ 0.5
RAB3BP20337 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RAB3BP20337 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3BP20337 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB3BP20337 AC099791.2-201ENST00000605725 427 ntBASIC18.18■□□□□ 0.5
RAB3BP20337 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3BP20337 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3BP20337 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RAB3BP20337 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB3BP20337 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3BP20337 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3BP20337 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3BP20337 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB3BP20337 AC112907.3-201ENST00000577781 2400 ntBASIC18.18■□□□□ 0.5
RAB3BP20337 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB3BP20337 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB3BP20337 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3BP20337 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB3BP20337 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RAB3BP20337 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
RAB3BP20337 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RAB3BP20337 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RAB3BP20337 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RAB3BP20337 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3BP20337 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3BP20337 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3BP20337 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3BP20337 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3BP20337 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3BP20337 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB3BP20337 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3BP20337 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB3BP20337 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3BP20337 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3BP20337 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3BP20337 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3BP20337 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB3BP20337 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3BP20337 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB3BP20337 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3BP20337 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3BP20337 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.16■□□□□ 0.5
RAB3BP20337 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3BP20337 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3BP20337 MIR3181-201ENST00000578512 73 ntBASIC18.16■□□□□ 0.5
RAB3BP20337 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB3BP20337 MIR6724-1-201ENST00000616420 92 ntBASIC18.16■□□□□ 0.5
RAB3BP20337 MIR6724-2-201ENST00000616483 92 ntBASIC18.16■□□□□ 0.5
RAB3BP20337 MIR6724-4-201ENST00000617390 92 ntBASIC18.16■□□□□ 0.5
RAB3BP20337 MIR6724-3-201ENST00000622482 92 ntBASIC18.16■□□□□ 0.5
RAB3BP20337 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB3BP20337 AL162377.1-201ENST00000618844 1793 ntBASIC18.16■□□□□ 0.5
RAB3BP20337 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3BP20337 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3BP20337 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3BP20337 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RAB3BP20337 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB3BP20337 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RAB3BP20337 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3BP20337 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3BP20337 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3BP20337 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3BP20337 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RAB3BP20337 AL512408.1-201ENST00000569378 2000 ntBASIC18.15■□□□□ 0.5
RAB3BP20337 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB3BP20337 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3BP20337 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3BP20337 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3BP20337 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB3BP20337 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RAB3BP20337 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3BP20337 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3BP20337 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB3BP20337 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3BP20337 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB3BP20337 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB3BP20337 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB3BP20337 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RAB3BP20337 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
RAB3BP20337 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms