Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
ATF4P18848 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ATF4P18848 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATF4P18848 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATF4P18848 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.28■□□□□ 0.36
ATF4P18848 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATF4P18848 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.27■□□□□ 0.36
ATF4P18848 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.27■□□□□ 0.36
ATF4P18848 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
ATF4P18848 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATF4P18848 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATF4P18848 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATF4P18848 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.27■□□□□ 0.36
ATF4P18848 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATF4P18848 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ATF4P18848 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATF4P18848 AC120024.1-201ENST00000562672 995 ntBASIC17.27■□□□□ 0.36
ATF4P18848 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.27■□□□□ 0.36
ATF4P18848 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.27■□□□□ 0.36
ATF4P18848 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.27■□□□□ 0.36
ATF4P18848 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATF4P18848 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ATF4P18848 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ATF4P18848 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATF4P18848 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATF4P18848 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
ATF4P18848 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ATF4P18848 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
ATF4P18848 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ATF4P18848 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ATF4P18848 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ATF4P18848 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ATF4P18848 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ATF4P18848 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.26■□□□□ 0.35
ATF4P18848 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.26■□□□□ 0.35
ATF4P18848 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.26■□□□□ 0.35
ATF4P18848 Z92544.1-202ENST00000571933 1220 ntBASIC17.26■□□□□ 0.35
ATF4P18848 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ATF4P18848 TNXA-203ENST00000507684 2038 ntBASIC17.26■□□□□ 0.35
ATF4P18848 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.26■□□□□ 0.35
ATF4P18848 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF4P18848 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ATF4P18848 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF4P18848 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
ATF4P18848 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF4P18848 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF4P18848 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF4P18848 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
ATF4P18848 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.25■□□□□ 0.35
ATF4P18848 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATF4P18848 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF4P18848 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.25■□□□□ 0.35
ATF4P18848 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.25■□□□□ 0.35
ATF4P18848 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ATF4P18848 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.25■□□□□ 0.35
ATF4P18848 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.25■□□□□ 0.35
ATF4P18848 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF4P18848 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.25■□□□□ 0.35
ATF4P18848 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.25■□□□□ 0.35
ATF4P18848 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATF4P18848 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF4P18848 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ATF4P18848 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.25■□□□□ 0.35
ATF4P18848 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF4P18848 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF4P18848 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF4P18848 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATF4P18848 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATF4P18848 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATF4P18848 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATF4P18848 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATF4P18848 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
ATF4P18848 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ATF4P18848 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATF4P18848 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATF4P18848 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATF4P18848 GUSBP5-201ENST00000418136 578 ntBASIC17.24■□□□□ 0.35
ATF4P18848 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.24■□□□□ 0.35
ATF4P18848 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATF4P18848 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.24■□□□□ 0.35
ATF4P18848 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATF4P18848 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms