Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL3P10147 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL3P10147 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL3P10147 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.99■□□□□ 0.63
CCL3P10147 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCL3P10147 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCL3P10147 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.99■□□□□ 0.63
CCL3P10147 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL3P10147 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.99■□□□□ 0.63
CCL3P10147 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CCL3P10147 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.99■□□□□ 0.63
CCL3P10147 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.99■□□□□ 0.63
CCL3P10147 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.99■□□□□ 0.63
CCL3P10147 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.99■□□□□ 0.63
CCL3P10147 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCL3P10147 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL3P10147 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.99■□□□□ 0.63
CCL3P10147 Z98882.1-201ENST00000622160 2253 ntBASIC18.99■□□□□ 0.63
CCL3P10147 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCL3P10147 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL3P10147 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCL3P10147 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCL3P10147 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCL3P10147 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCL3P10147 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCL3P10147 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCL3P10147 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCL3P10147 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCL3P10147 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.98■□□□□ 0.63
CCL3P10147 AL512625.2-201ENST00000417533 625 ntBASIC18.98■□□□□ 0.63
CCL3P10147 CDV3P1-201ENST00000471403 739 ntBASIC18.98■□□□□ 0.63
CCL3P10147 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.98■□□□□ 0.63
CCL3P10147 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCL3P10147 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCL3P10147 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCL3P10147 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.98■□□□□ 0.63
CCL3P10147 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.98■□□□□ 0.63
CCL3P10147 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCL3P10147 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL3P10147 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.97■□□□□ 0.63
CCL3P10147 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.97■□□□□ 0.63
CCL3P10147 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL3P10147 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL3P10147 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL3P10147 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL3P10147 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.97■□□□□ 0.63
CCL3P10147 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL3P10147 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCL3P10147 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCL3P10147 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCL3P10147 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.97■□□□□ 0.63
CCL3P10147 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.97■□□□□ 0.63
CCL3P10147 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL3P10147 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.97■□□□□ 0.63
CCL3P10147 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL3P10147 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL3P10147 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.97■□□□□ 0.63
CCL3P10147 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL3P10147 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CCL3P10147 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.97■□□□□ 0.63
CCL3P10147 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCL3P10147 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCL3P10147 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCL3P10147 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CCL3P10147 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.96■□□□□ 0.63
CCL3P10147 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCL3P10147 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.96■□□□□ 0.63
CCL3P10147 MIPEPP3-201ENST00000412105 444 ntBASIC18.96■□□□□ 0.63
CCL3P10147 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.96■□□□□ 0.63
CCL3P10147 AC098934.4-201ENST00000564127 592 ntBASIC18.96■□□□□ 0.63
CCL3P10147 FAM21FP-204ENST00000608637 956 ntBASIC18.96■□□□□ 0.63
CCL3P10147 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCL3P10147 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CCL3P10147 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCL3P10147 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL3P10147 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL3P10147 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL3P10147 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCL3P10147 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
CCL3P10147 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL3P10147 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.95■□□□□ 0.62
CCL3P10147 AC010980.2-201ENST00000587099 1412 ntBASIC18.95■□□□□ 0.62
CCL3P10147 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CCL3P10147 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCL3P10147 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.95■□□□□ 0.62
CCL3P10147 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.95■□□□□ 0.62
CCL3P10147 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCL3P10147 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL3P10147 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL3P10147 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.95■□□□□ 0.62
CCL3P10147 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCL3P10147 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.95■□□□□ 0.62
CCL3P10147 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL3P10147 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL3P10147 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.95■□□□□ 0.62
CCL3P10147 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCL3P10147 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL3P10147 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL3P10147 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL3P10147 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms