Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HNRNPCL4P0DMR1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 AC061975.6-201ENST00000579045 1553 ntBASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 POU5F1P4-201ENST00000413175 1085 ntBASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 AC079140.4-201ENST00000507448 529 ntBASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 AC008175.2-201ENST00000612840 297 ntBASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 MIR6084-201ENST00000622012 110 ntBASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HNRNPCL4P0DMR1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HNRNPCL4P0DMR1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HNRNPCL4P0DMR1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HNRNPCL4P0DMR1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
HNRNPCL4P0DMR1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HNRNPCL4P0DMR1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HNRNPCL4P0DMR1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HNRNPCL4P0DMR1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.27■□□□□ 0.68
HNRNPCL4P0DMR1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.27■□□□□ 0.68
HNRNPCL4P0DMR1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HNRNPCL4P0DMR1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.27■□□□□ 0.68
HNRNPCL4P0DMR1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HNRNPCL4P0DMR1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HNRNPCL4P0DMR1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
HNRNPCL4P0DMR1 KRT87P-202ENST00000534226 1464 ntBASIC19.27■□□□□ 0.67
HNRNPCL4P0DMR1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.27■□□□□ 0.67
HNRNPCL4P0DMR1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HNRNPCL4P0DMR1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.27■□□□□ 0.67
HNRNPCL4P0DMR1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HNRNPCL4P0DMR1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HNRNPCL4P0DMR1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HNRNPCL4P0DMR1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HNRNPCL4P0DMR1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.26■□□□□ 0.67
HNRNPCL4P0DMR1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HNRNPCL4P0DMR1 LINC01006-201ENST00000333319 2292 ntBASIC19.26■□□□□ 0.67
HNRNPCL4P0DMR1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HNRNPCL4P0DMR1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HNRNPCL4P0DMR1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HNRNPCL4P0DMR1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HNRNPCL4P0DMR1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HNRNPCL4P0DMR1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HNRNPCL4P0DMR1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HNRNPCL4P0DMR1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.26■□□□□ 0.67
HNRNPCL4P0DMR1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HNRNPCL4P0DMR1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HNRNPCL4P0DMR1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms