Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.82■■□□□ 1.24
TPM1P09493 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TPM1P09493 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
TPM1P09493 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.82■■□□□ 1.24
TPM1P09493 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.81■■□□□ 1.24
TPM1P09493 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
TPM1P09493 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.81■■□□□ 1.24
TPM1P09493 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.81■■□□□ 1.24
TPM1P09493 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TPM1P09493 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
TPM1P09493 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.81■■□□□ 1.24
TPM1P09493 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.81■■□□□ 1.24
TPM1P09493 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TPM1P09493 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
TPM1P09493 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
TPM1P09493 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TPM1P09493 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TPM1P09493 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TPM1P09493 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.8■■□□□ 1.24
TPM1P09493 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TPM1P09493 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TPM1P09493 AC121338.2-201ENST00000622535 1744 ntBASIC22.8■■□□□ 1.24
TPM1P09493 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.8■■□□□ 1.24
TPM1P09493 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.8■■□□□ 1.24
TPM1P09493 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TPM1P09493 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.8■■□□□ 1.24
TPM1P09493 GUSBP5-201ENST00000418136 578 ntBASIC22.8■■□□□ 1.24
TPM1P09493 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
TPM1P09493 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.8■■□□□ 1.24
TPM1P09493 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TPM1P09493 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.8■■□□□ 1.24
TPM1P09493 AL035685.1-201ENST00000636663 812 ntBASIC22.8■■□□□ 1.24
TPM1P09493 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
TPM1P09493 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.8■■□□□ 1.24
TPM1P09493 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TPM1P09493 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TPM1P09493 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TPM1P09493 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
TPM1P09493 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
TPM1P09493 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
TPM1P09493 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TPM1P09493 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
TPM1P09493 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TPM1P09493 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TPM1P09493 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TPM1P09493 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.79■■□□□ 1.24
TPM1P09493 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
TPM1P09493 AC073314.1-201ENST00000568729 2216 ntBASIC22.79■■□□□ 1.24
TPM1P09493 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TPM1P09493 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TPM1P09493 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TPM1P09493 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
TPM1P09493 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TPM1P09493 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.79■■□□□ 1.24
TPM1P09493 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
TPM1P09493 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
TPM1P09493 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TPM1P09493 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.78■■□□□ 1.24
TPM1P09493 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TPM1P09493 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.78■■□□□ 1.24
TPM1P09493 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TPM1P09493 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TPM1P09493 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
TPM1P09493 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TPM1P09493 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.77■■□□□ 1.24
TPM1P09493 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.77■■□□□ 1.24
TPM1P09493 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.77■■□□□ 1.24
TPM1P09493 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.77■■□□□ 1.24
TPM1P09493 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TPM1P09493 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.77■■□□□ 1.24
TPM1P09493 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.77■■□□□ 1.24
TPM1P09493 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
TPM1P09493 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TPM1P09493 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TPM1P09493 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TPM1P09493 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TPM1P09493 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.77■■□□□ 1.24
TPM1P09493 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.23
TPM1P09493 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
TPM1P09493 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.77■■□□□ 1.23
TPM1P09493 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
TPM1P09493 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.76■■□□□ 1.23
TPM1P09493 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
TPM1P09493 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.76■■□□□ 1.23
TPM1P09493 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TPM1P09493 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TPM1P09493 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TPM1P09493 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.76■■□□□ 1.23
TPM1P09493 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TPM1P09493 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
TPM1P09493 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TPM1P09493 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.76■■□□□ 1.23
TPM1P09493 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TPM1P09493 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.76■■□□□ 1.23
TPM1P09493 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.76■■□□□ 1.23
TPM1P09493 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
TPM1P09493 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TPM1P09493 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
TPM1P09493 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TPM1P09493 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms