Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQB2P05538 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQB2P05538 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQB2P05538 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQB2P05538 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.11■□□□□ 0.97
HLA-DQB2P05538 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQB2P05538 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.11■□□□□ 0.97
HLA-DQB2P05538 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.11■□□□□ 0.97
HLA-DQB2P05538 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQB2P05538 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQB2P05538 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
HLA-DQB2P05538 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQB2P05538 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQB2P05538 RBM17P2-201ENST00000616397 1405 ntBASIC21.11■□□□□ 0.97
HLA-DQB2P05538 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQB2P05538 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQB2P05538 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DQB2P05538 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HLA-DQB2P05538 AC016769.1-201ENST00000409132 1010 ntBASIC21.1■□□□□ 0.97
HLA-DQB2P05538 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.1■□□□□ 0.97
HLA-DQB2P05538 AC022517.1-201ENST00000592429 346 ntBASIC21.1■□□□□ 0.97
HLA-DQB2P05538 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DQB2P05538 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DQB2P05538 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.1■□□□□ 0.97
HLA-DQB2P05538 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DQB2P05538 PLK5-205ENST00000642079 1969 ntBASIC21.1■□□□□ 0.97
HLA-DQB2P05538 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.1■□□□□ 0.97
HLA-DQB2P05538 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DQB2P05538 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HLA-DQB2P05538 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB2P05538 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB2P05538 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB2P05538 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB2P05538 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB2P05538 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB2P05538 AC006015.1-201ENST00000429970 570 ntBASIC21.09■□□□□ 0.97
HLA-DQB2P05538 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.09■□□□□ 0.97
HLA-DQB2P05538 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB2P05538 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB2P05538 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB2P05538 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB2P05538 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB2P05538 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB2P05538 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQB2P05538 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
HLA-DQB2P05538 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DQB2P05538 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DQB2P05538 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.08■□□□□ 0.97
HLA-DQB2P05538 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.08■□□□□ 0.97
HLA-DQB2P05538 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DQB2P05538 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DQB2P05538 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DQB2P05538 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.08■□□□□ 0.97
HLA-DQB2P05538 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.08■□□□□ 0.97
HLA-DQB2P05538 KRT18P11-201ENST00000435214 1283 ntBASIC21.08■□□□□ 0.97
HLA-DQB2P05538 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
HLA-DQB2P05538 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.08■□□□□ 0.97
HLA-DQB2P05538 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.08■□□□□ 0.97
HLA-DQB2P05538 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.08■□□□□ 0.97
HLA-DQB2P05538 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HLA-DQB2P05538 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
HLA-DQB2P05538 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
HLA-DQB2P05538 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
HLA-DQB2P05538 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.08■□□□□ 0.96
HLA-DQB2P05538 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
HLA-DQB2P05538 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
HLA-DQB2P05538 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQB2P05538 AC121338.2-201ENST00000622535 1744 ntBASIC21.07■□□□□ 0.96
HLA-DQB2P05538 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQB2P05538 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQB2P05538 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQB2P05538 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQB2P05538 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQB2P05538 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.07■□□□□ 0.96
HLA-DQB2P05538 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HLA-DQB2P05538 MFSD11-216ENST00000590393 1141 ntBASIC21.07■□□□□ 0.96
HLA-DQB2P05538 AC243732.1-201ENST00000612648 864 ntBASIC21.07■□□□□ 0.96
HLA-DQB2P05538 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.07■□□□□ 0.96
HLA-DQB2P05538 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.07■□□□□ 0.96
HLA-DQB2P05538 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQB2P05538 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQB2P05538 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQB2P05538 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQB2P05538 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQB2P05538 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQB2P05538 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQB2P05538 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQB2P05538 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQB2P05538 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQB2P05538 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HLA-DQB2P05538 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms