Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.8■□□□□ 0.6
HMGN1P05114 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGN1P05114 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGN1P05114 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGN1P05114 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGN1P05114 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGN1P05114 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
HMGN1P05114 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HMGN1P05114 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.79■□□□□ 0.6
HMGN1P05114 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HMGN1P05114 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.79■□□□□ 0.6
HMGN1P05114 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.79■□□□□ 0.6
HMGN1P05114 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.79■□□□□ 0.6
HMGN1P05114 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGN1P05114 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HMGN1P05114 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGN1P05114 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGN1P05114 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGN1P05114 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGN1P05114 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HMGN1P05114 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGN1P05114 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HMGN1P05114 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGN1P05114 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGN1P05114 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HMGN1P05114 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGN1P05114 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGN1P05114 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGN1P05114 AC233992.3-201ENST00000607491 485 ntBASIC18.78■□□□□ 0.6
HMGN1P05114 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.78■□□□□ 0.6
HMGN1P05114 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGN1P05114 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGN1P05114 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGN1P05114 AC055733.4-201ENST00000638462 1354 ntBASIC18.78■□□□□ 0.6
HMGN1P05114 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGN1P05114 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGN1P05114 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGN1P05114 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGN1P05114 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HMGN1P05114 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGN1P05114 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGN1P05114 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
HMGN1P05114 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HMGN1P05114 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGN1P05114 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMGN1P05114 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGN1P05114 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGN1P05114 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HMGN1P05114 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMGN1P05114 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.77■□□□□ 0.6
HMGN1P05114 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGN1P05114 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGN1P05114 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGN1P05114 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGN1P05114 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGN1P05114 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGN1P05114 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGN1P05114 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMGN1P05114 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HMGN1P05114 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMGN1P05114 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGN1P05114 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HMGN1P05114 AC020907.5-201ENST00000624372 1936 ntBASIC18.76■□□□□ 0.59
HMGN1P05114 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGN1P05114 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGN1P05114 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGN1P05114 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGN1P05114 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HMGN1P05114 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGN1P05114 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGN1P05114 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGN1P05114 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGN1P05114 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGN1P05114 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGN1P05114 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGN1P05114 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HMGN1P05114 AC027702.1-201ENST00000563810 1770 ntBASIC18.76■□□□□ 0.59
HMGN1P05114 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGN1P05114 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGN1P05114 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGN1P05114 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGN1P05114 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HMGN1P05114 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms