Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL596275.1-201ENST00000423464 877 ntBASIC19.4■□□□□ 0.7
PDGFAP04085 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.4■□□□□ 0.7
PDGFAP04085 AC128676.1-201ENST00000454392 318 ntBASIC19.4■□□□□ 0.7
PDGFAP04085 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.4■□□□□ 0.7
PDGFAP04085 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.4■□□□□ 0.7
PDGFAP04085 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.4■□□□□ 0.7
PDGFAP04085 AC008175.2-201ENST00000612840 297 ntBASIC19.4■□□□□ 0.7
PDGFAP04085 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.4■□□□□ 0.7
PDGFAP04085 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFAP04085 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.4■□□□□ 0.7
PDGFAP04085 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.4■□□□□ 0.7
PDGFAP04085 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFAP04085 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFAP04085 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFAP04085 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PDGFAP04085 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDGFAP04085 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PDGFAP04085 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
PDGFAP04085 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.39■□□□□ 0.69
PDGFAP04085 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
PDGFAP04085 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.39■□□□□ 0.69
PDGFAP04085 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.39■□□□□ 0.69
PDGFAP04085 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.39■□□□□ 0.69
PDGFAP04085 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.39■□□□□ 0.69
PDGFAP04085 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFAP04085 AC120498.10-201ENST00000621827 505 ntBASIC19.39■□□□□ 0.69
PDGFAP04085 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.39■□□□□ 0.69
PDGFAP04085 RBM17P2-201ENST00000616397 1405 ntBASIC19.39■□□□□ 0.69
PDGFAP04085 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PDGFAP04085 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFAP04085 AC127496.7-201ENST00000625110 1798 ntBASIC19.39■□□□□ 0.69
PDGFAP04085 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PDGFAP04085 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFAP04085 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFAP04085 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFAP04085 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFAP04085 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFAP04085 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFAP04085 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFAP04085 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFAP04085 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFAP04085 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFAP04085 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFAP04085 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFAP04085 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.38■□□□□ 0.69
PDGFAP04085 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFAP04085 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.38■□□□□ 0.69
PDGFAP04085 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.38■□□□□ 0.69
PDGFAP04085 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.38■□□□□ 0.69
PDGFAP04085 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PDGFAP04085 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
PDGFAP04085 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PDGFAP04085 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.38■□□□□ 0.69
PDGFAP04085 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFAP04085 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.38■□□□□ 0.69
PDGFAP04085 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.38■□□□□ 0.69
PDGFAP04085 AP006294.2-201ENST00000641667 209 ntBASIC19.38■□□□□ 0.69
PDGFAP04085 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFAP04085 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
PDGFAP04085 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFAP04085 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFAP04085 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PDGFAP04085 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFAP04085 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.37■□□□□ 0.69
PDGFAP04085 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PDGFAP04085 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PDGFAP04085 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFAP04085 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.37■□□□□ 0.69
PDGFAP04085 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.37■□□□□ 0.69
PDGFAP04085 AC142381.4-202ENST00000563973 229 ntBASIC19.37■□□□□ 0.69
PDGFAP04085 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PDGFAP04085 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PDGFAP04085 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFAP04085 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFAP04085 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFAP04085 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFAP04085 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFAP04085 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFAP04085 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFAP04085 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFAP04085 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PDGFAP04085 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFAP04085 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFAP04085 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFAP04085 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.36■□□□□ 0.69
PDGFAP04085 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.36■□□□□ 0.69
PDGFAP04085 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.36■□□□□ 0.69
PDGFAP04085 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.36■□□□□ 0.69
PDGFAP04085 AL591742.1-201ENST00000604433 565 ntBASIC19.36■□□□□ 0.69
PDGFAP04085 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFAP04085 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.36■□□□□ 0.69
PDGFAP04085 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.36■□□□□ 0.69
PDGFAP04085 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFAP04085 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFAP04085 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.36■□□□□ 0.69
PDGFAP04085 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFAP04085 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFAP04085 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.35■□□□□ 0.69
PDGFAP04085 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PDGFAP04085 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms