Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NGFP01138 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NGFP01138 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.02■□□□□ 0.48
NGFP01138 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.02■□□□□ 0.48
NGFP01138 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.02■□□□□ 0.48
NGFP01138 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.02■□□□□ 0.48
NGFP01138 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.02■□□□□ 0.48
NGFP01138 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NGFP01138 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.02■□□□□ 0.47
NGFP01138 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NGFP01138 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
NGFP01138 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NGFP01138 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NGFP01138 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NGFP01138 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NGFP01138 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.01■□□□□ 0.47
NGFP01138 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NGFP01138 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.01■□□□□ 0.47
NGFP01138 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.01■□□□□ 0.47
NGFP01138 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NGFP01138 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.01■□□□□ 0.47
NGFP01138 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.01■□□□□ 0.47
NGFP01138 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.01■□□□□ 0.47
NGFP01138 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NGFP01138 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NGFP01138 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.01■□□□□ 0.47
NGFP01138 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18■□□□□ 0.47
NGFP01138 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NGFP01138 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18■□□□□ 0.47
NGFP01138 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18■□□□□ 0.47
NGFP01138 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NGFP01138 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18■□□□□ 0.47
NGFP01138 AC016769.1-201ENST00000409132 1010 ntBASIC18■□□□□ 0.47
NGFP01138 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NGFP01138 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18■□□□□ 0.47
NGFP01138 IKBKGP1-201ENST00000612193 1073 ntBASIC18■□□□□ 0.47
NGFP01138 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18■□□□□ 0.47
NGFP01138 MYCNOS-205ENST00000641950 531 ntBASIC18■□□□□ 0.47
NGFP01138 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NGFP01138 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NGFP01138 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
NGFP01138 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18■□□□□ 0.47
NGFP01138 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18■□□□□ 0.47
NGFP01138 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18■□□□□ 0.47
NGFP01138 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
NGFP01138 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18■□□□□ 0.47
NGFP01138 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NGFP01138 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NGFP01138 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NGFP01138 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.99■□□□□ 0.47
NGFP01138 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NGFP01138 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NGFP01138 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NGFP01138 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NGFP01138 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.99■□□□□ 0.47
NGFP01138 AC006015.1-201ENST00000429970 570 ntBASIC17.99■□□□□ 0.47
NGFP01138 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NGFP01138 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.99■□□□□ 0.47
NGFP01138 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.99■□□□□ 0.47
NGFP01138 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NGFP01138 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.99■□□□□ 0.47
NGFP01138 SLC7A5P1-201ENST00000568957 537 ntBASIC17.99■□□□□ 0.47
NGFP01138 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NGFP01138 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.99■□□□□ 0.47
NGFP01138 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.99■□□□□ 0.47
NGFP01138 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NGFP01138 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.99■□□□□ 0.47
NGFP01138 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NGFP01138 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NGFP01138 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
NGFP01138 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NGFP01138 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.99■□□□□ 0.47
NGFP01138 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.99■□□□□ 0.47
NGFP01138 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NGFP01138 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NGFP01138 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NGFP01138 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.98■□□□□ 0.47
NGFP01138 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NGFP01138 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NGFP01138 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.98■□□□□ 0.47
NGFP01138 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.98■□□□□ 0.47
NGFP01138 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NGFP01138 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.98■□□□□ 0.47
NGFP01138 RARRES2P11-201ENST00000635158 484 ntBASIC17.98■□□□□ 0.47
NGFP01138 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NGFP01138 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NGFP01138 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.98■□□□□ 0.47
NGFP01138 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NGFP01138 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NGFP01138 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NGFP01138 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
NGFP01138 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NGFP01138 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.97■□□□□ 0.47
NGFP01138 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NGFP01138 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NGFP01138 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NGFP01138 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NGFP01138 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.97■□□□□ 0.47
NGFP01138 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NGFP01138 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms