Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MT-CO1P00395 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MT-CO1P00395 HLA-L-209ENST00000420110 1011 ntBASIC21.3■■□□□ 1
MT-CO1P00395 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.3■■□□□ 1
MT-CO1P00395 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.3■■□□□ 1
MT-CO1P00395 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.3■■□□□ 1
MT-CO1P00395 AC013268.1-206ENST00000638368 961 ntBASIC21.3■■□□□ 1
MT-CO1P00395 AC112229.1-201ENST00000639295 961 ntBASIC21.3■■□□□ 1
MT-CO1P00395 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.3■■□□□ 1
MT-CO1P00395 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.3■■□□□ 1
MT-CO1P00395 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.3■■□□□ 1
MT-CO1P00395 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
MT-CO1P00395 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
MT-CO1P00395 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MT-CO1P00395 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.29■■□□□ 1
MT-CO1P00395 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.29■■□□□ 1
MT-CO1P00395 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.29■■□□□ 1
MT-CO1P00395 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MT-CO1P00395 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.29■■□□□ 1
MT-CO1P00395 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MT-CO1P00395 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.29■■□□□ 1
MT-CO1P00395 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
MT-CO1P00395 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.29■■□□□ 1
MT-CO1P00395 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.29■■□□□ 1
MT-CO1P00395 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.29■■□□□ 1
MT-CO1P00395 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.29■■□□□ 1
MT-CO1P00395 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.29■■□□□ 1
MT-CO1P00395 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.29■■□□□ 1
MT-CO1P00395 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.29■■□□□ 1
MT-CO1P00395 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
MT-CO1P00395 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.29■■□□□ 1
MT-CO1P00395 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MT-CO1P00395 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MT-CO1P00395 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.28■■□□□ 1
MT-CO1P00395 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.28■■□□□ 1
MT-CO1P00395 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
MT-CO1P00395 NCF1B-203ENST00000435988 1254 ntBASIC21.28■■□□□ 1
MT-CO1P00395 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.28■■□□□ 1
MT-CO1P00395 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.28■■□□□ 1
MT-CO1P00395 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.28■■□□□ 1
MT-CO1P00395 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MT-CO1P00395 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.28■■□□□ 1
MT-CO1P00395 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MT-CO1P00395 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MT-CO1P00395 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.28■■□□□ 1
MT-CO1P00395 AC068338.2-201ENST00000563278 1430 ntBASIC21.28■■□□□ 1
MT-CO1P00395 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MT-CO1P00395 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MT-CO1P00395 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
MT-CO1P00395 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.27■■□□□ 1
MT-CO1P00395 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MT-CO1P00395 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.27■■□□□ 1
MT-CO1P00395 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.27■■□□□ 1
MT-CO1P00395 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.27■■□□□ 1
MT-CO1P00395 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MT-CO1P00395 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.27■■□□□ 1
MT-CO1P00395 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.27■■□□□ 1
MT-CO1P00395 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.27■■□□□ 1
MT-CO1P00395 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.27■■□□□ 1
MT-CO1P00395 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.27■■□□□ 1
MT-CO1P00395 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.27■■□□□ 1
MT-CO1P00395 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.27■■□□□ 1
MT-CO1P00395 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
MT-CO1P00395 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
MT-CO1P00395 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.27■■□□□ 1
MT-CO1P00395 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
MT-CO1P00395 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.27■□□□□ 0.99
MT-CO1P00395 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MT-CO1P00395 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
MT-CO1P00395 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.26■□□□□ 0.99
MT-CO1P00395 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.26■□□□□ 0.99
MT-CO1P00395 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
MT-CO1P00395 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
MT-CO1P00395 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
MT-CO1P00395 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.26■□□□□ 0.99
MT-CO1P00395 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
MT-CO1P00395 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MT-CO1P00395 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MT-CO1P00395 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.26■□□□□ 0.99
MT-CO1P00395 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MT-CO1P00395 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
MT-CO1P00395 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-CO1P00395 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
MT-CO1P00395 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-CO1P00395 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-CO1P00395 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.25■□□□□ 0.99
MT-CO1P00395 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MT-CO1P00395 AC007322.4-201ENST00000509611 723 ntBASIC21.25■□□□□ 0.99
MT-CO1P00395 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MT-CO1P00395 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.25■□□□□ 0.99
MT-CO1P00395 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-CO1P00395 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.25■□□□□ 0.99
MT-CO1P00395 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-CO1P00395 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-CO1P00395 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-CO1P00395 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-CO1P00395 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-CO1P00395 AC244015.2-201ENST00000616358 1861 ntBASIC21.24■□□□□ 0.99
MT-CO1P00395 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-CO1P00395 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 403.8 ms