Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
ALDH1A1P00352 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC24■■□□□ 1.43
ALDH1A1P00352 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
ALDH1A1P00352 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
ALDH1A1P00352 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ALDH1A1P00352 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
ALDH1A1P00352 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC24■■□□□ 1.43
ALDH1A1P00352 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
ALDH1A1P00352 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24■■□□□ 1.43
ALDH1A1P00352 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC24■■□□□ 1.43
ALDH1A1P00352 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
ALDH1A1P00352 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
ALDH1A1P00352 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ALDH1A1P00352 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ALDH1A1P00352 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.99■■□□□ 1.43
ALDH1A1P00352 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
ALDH1A1P00352 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.99■■□□□ 1.43
ALDH1A1P00352 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.99■■□□□ 1.43
ALDH1A1P00352 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ALDH1A1P00352 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ALDH1A1P00352 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ALDH1A1P00352 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ALDH1A1P00352 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.99■■□□□ 1.43
ALDH1A1P00352 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ALDH1A1P00352 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.99■■□□□ 1.43
ALDH1A1P00352 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ALDH1A1P00352 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
ALDH1A1P00352 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ALDH1A1P00352 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ALDH1A1P00352 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.98■■□□□ 1.43
ALDH1A1P00352 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.98■■□□□ 1.43
ALDH1A1P00352 RN7SL850P-201ENST00000579959 291 ntBASIC23.98■■□□□ 1.43
ALDH1A1P00352 AC120498.8-201ENST00000614275 531 ntBASIC23.98■■□□□ 1.43
ALDH1A1P00352 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.98■■□□□ 1.43
ALDH1A1P00352 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ALDH1A1P00352 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
ALDH1A1P00352 CYP21A1P-202ENST00000354927 1481 ntBASIC23.98■■□□□ 1.43
ALDH1A1P00352 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ALDH1A1P00352 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ALDH1A1P00352 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ALDH1A1P00352 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
ALDH1A1P00352 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.98■■□□□ 1.43
ALDH1A1P00352 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ALDH1A1P00352 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ALDH1A1P00352 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ALDH1A1P00352 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ALDH1A1P00352 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ALDH1A1P00352 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
ALDH1A1P00352 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.97■■□□□ 1.43
ALDH1A1P00352 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.97■■□□□ 1.43
ALDH1A1P00352 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
ALDH1A1P00352 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.97■■□□□ 1.43
ALDH1A1P00352 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.97■■□□□ 1.43
ALDH1A1P00352 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.97■■□□□ 1.43
ALDH1A1P00352 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.97■■□□□ 1.43
ALDH1A1P00352 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ALDH1A1P00352 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.96■■□□□ 1.43
ALDH1A1P00352 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
ALDH1A1P00352 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ALDH1A1P00352 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ALDH1A1P00352 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ALDH1A1P00352 AC003102.1-202ENST00000563394 1796 ntBASIC23.96■■□□□ 1.43
ALDH1A1P00352 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ALDH1A1P00352 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ALDH1A1P00352 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ALDH1A1P00352 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ALDH1A1P00352 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ALDH1A1P00352 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ALDH1A1P00352 KRASP1-201ENST00000407852 552 ntBASIC23.96■■□□□ 1.43
ALDH1A1P00352 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.96■■□□□ 1.43
ALDH1A1P00352 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.96■■□□□ 1.43
ALDH1A1P00352 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
ALDH1A1P00352 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
ALDH1A1P00352 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
ALDH1A1P00352 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC23.95■■□□□ 1.42
ALDH1A1P00352 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ALDH1A1P00352 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ALDH1A1P00352 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
ALDH1A1P00352 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
ALDH1A1P00352 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ALDH1A1P00352 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ALDH1A1P00352 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ALDH1A1P00352 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
ALDH1A1P00352 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ALDH1A1P00352 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.95■■□□□ 1.42
ALDH1A1P00352 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ALDH1A1P00352 C2orf69P4-201ENST00000565394 541 ntBASIC23.95■■□□□ 1.42
ALDH1A1P00352 AL049597.2-201ENST00000565575 961 ntBASIC23.95■■□□□ 1.42
ALDH1A1P00352 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.95■■□□□ 1.42
ALDH1A1P00352 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ALDH1A1P00352 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ALDH1A1P00352 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
ALDH1A1P00352 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.95■■□□□ 1.42
ALDH1A1P00352 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ALDH1A1P00352 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ALDH1A1P00352 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ALDH1A1P00352 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ALDH1A1P00352 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
ALDH1A1P00352 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ALDH1A1P00352 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms