Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLPTM1O96005 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.55■□□□□ 0.72
CLPTM1O96005 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.55■□□□□ 0.72
CLPTM1O96005 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.55■□□□□ 0.72
CLPTM1O96005 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.55■□□□□ 0.72
CLPTM1O96005 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.55■□□□□ 0.72
CLPTM1O96005 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.55■□□□□ 0.72
CLPTM1O96005 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.55■□□□□ 0.72
CLPTM1O96005 MIR3621-201ENST00000580529 85 ntBASIC19.55■□□□□ 0.72
CLPTM1O96005 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.55■□□□□ 0.72
CLPTM1O96005 AL356740.2-201ENST00000601559 647 ntBASIC19.55■□□□□ 0.72
CLPTM1O96005 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CLPTM1O96005 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLPTM1O96005 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLPTM1O96005 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CLPTM1O96005 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLPTM1O96005 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLPTM1O96005 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.55■□□□□ 0.72
CLPTM1O96005 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.55■□□□□ 0.72
CLPTM1O96005 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CLPTM1O96005 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLPTM1O96005 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLPTM1O96005 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLPTM1O96005 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.54■□□□□ 0.72
CLPTM1O96005 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.54■□□□□ 0.72
CLPTM1O96005 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLPTM1O96005 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLPTM1O96005 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.54■□□□□ 0.72
CLPTM1O96005 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLPTM1O96005 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPTM1O96005 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPTM1O96005 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CLPTM1O96005 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.53■□□□□ 0.72
CLPTM1O96005 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPTM1O96005 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CLPTM1O96005 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLPTM1O96005 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPTM1O96005 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.53■□□□□ 0.72
CLPTM1O96005 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.53■□□□□ 0.72
CLPTM1O96005 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPTM1O96005 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPTM1O96005 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.53■□□□□ 0.72
CLPTM1O96005 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.53■□□□□ 0.72
CLPTM1O96005 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLPTM1O96005 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPTM1O96005 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPTM1O96005 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLPTM1O96005 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLPTM1O96005 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
CLPTM1O96005 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLPTM1O96005 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLPTM1O96005 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLPTM1O96005 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLPTM1O96005 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.52■□□□□ 0.72
CLPTM1O96005 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.52■□□□□ 0.72
CLPTM1O96005 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.52■□□□□ 0.72
CLPTM1O96005 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.52■□□□□ 0.72
CLPTM1O96005 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.52■□□□□ 0.72
CLPTM1O96005 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CLPTM1O96005 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CLPTM1O96005 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.52■□□□□ 0.72
CLPTM1O96005 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
CLPTM1O96005 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLPTM1O96005 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLPTM1O96005 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLPTM1O96005 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CLPTM1O96005 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CLPTM1O96005 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLPTM1O96005 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPTM1O96005 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.51■□□□□ 0.71
CLPTM1O96005 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
CLPTM1O96005 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPTM1O96005 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPTM1O96005 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPTM1O96005 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPTM1O96005 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLPTM1O96005 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLPTM1O96005 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.51■□□□□ 0.71
CLPTM1O96005 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.51■□□□□ 0.71
CLPTM1O96005 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLPTM1O96005 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPTM1O96005 LETM1P2-201ENST00000597330 2178 ntBASIC19.51■□□□□ 0.71
CLPTM1O96005 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CLPTM1O96005 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPTM1O96005 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.51■□□□□ 0.71
CLPTM1O96005 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.51■□□□□ 0.71
CLPTM1O96005 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLPTM1O96005 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLPTM1O96005 C17orf82-201ENST00000623772 1530 ntBASIC19.51■□□□□ 0.71
CLPTM1O96005 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLPTM1O96005 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLPTM1O96005 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLPTM1O96005 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLPTM1O96005 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLPTM1O96005 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.5■□□□□ 0.71
CLPTM1O96005 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLPTM1O96005 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLPTM1O96005 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLPTM1O96005 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLPTM1O96005 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms