Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-2O95096 MIR5787-201ENST00000611784 55 ntBASIC19.21■□□□□ 0.67
NKX2-2O95096 RBM17P2-201ENST00000616397 1405 ntBASIC19.21■□□□□ 0.67
NKX2-2O95096 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.21■□□□□ 0.67
NKX2-2O95096 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-2O95096 MYCNOS-205ENST00000641950 531 ntBASIC19.21■□□□□ 0.67
NKX2-2O95096 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.21■□□□□ 0.67
NKX2-2O95096 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.21■□□□□ 0.67
NKX2-2O95096 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-2O95096 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-2O95096 AC011484.1-201ENST00000377652 1995 ntBASIC19.21■□□□□ 0.67
NKX2-2O95096 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-2O95096 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
NKX2-2O95096 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NKX2-2O95096 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.2■□□□□ 0.66
NKX2-2O95096 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-2O95096 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.2■□□□□ 0.66
NKX2-2O95096 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-2O95096 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
NKX2-2O95096 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.2■□□□□ 0.66
NKX2-2O95096 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.2■□□□□ 0.66
NKX2-2O95096 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.2■□□□□ 0.66
NKX2-2O95096 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.2■□□□□ 0.66
NKX2-2O95096 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-2O95096 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.2■□□□□ 0.66
NKX2-2O95096 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-2O95096 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-2O95096 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-2O95096 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-2O95096 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.2■□□□□ 0.66
NKX2-2O95096 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-2O95096 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-2O95096 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-2O95096 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-2O95096 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-2O95096 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-2O95096 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-2O95096 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-2O95096 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.19■□□□□ 0.66
NKX2-2O95096 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NKX2-2O95096 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-2O95096 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-2O95096 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-2O95096 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.19■□□□□ 0.66
NKX2-2O95096 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NKX2-2O95096 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.19■□□□□ 0.66
NKX2-2O95096 AL162430.1-201ENST00000480705 870 ntBASIC19.19■□□□□ 0.66
NKX2-2O95096 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.19■□□□□ 0.66
NKX2-2O95096 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.19■□□□□ 0.66
NKX2-2O95096 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NKX2-2O95096 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.19■□□□□ 0.66
NKX2-2O95096 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.19■□□□□ 0.66
NKX2-2O95096 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.19■□□□□ 0.66
NKX2-2O95096 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NKX2-2O95096 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-2O95096 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.19■□□□□ 0.66
NKX2-2O95096 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-2O95096 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-2O95096 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-2O95096 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NKX2-2O95096 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-2O95096 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-2O95096 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NKX2-2O95096 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-2O95096 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.18■□□□□ 0.66
NKX2-2O95096 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.18■□□□□ 0.66
NKX2-2O95096 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.18■□□□□ 0.66
NKX2-2O95096 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-2O95096 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-2O95096 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-2O95096 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.18■□□□□ 0.66
NKX2-2O95096 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
NKX2-2O95096 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-2O95096 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-2O95096 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NKX2-2O95096 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-2O95096 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-2O95096 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX2-2O95096 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-2O95096 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NKX2-2O95096 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-2O95096 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-2O95096 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX2-2O95096 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.17■□□□□ 0.66
NKX2-2O95096 KRT18P11-201ENST00000435214 1283 ntBASIC19.17■□□□□ 0.66
NKX2-2O95096 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.17■□□□□ 0.66
NKX2-2O95096 AC137761.2-201ENST00000561729 223 ntBASIC19.17■□□□□ 0.66
NKX2-2O95096 AC145350.3-201ENST00000569033 163 ntBASIC19.17■□□□□ 0.66
NKX2-2O95096 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-2O95096 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-2O95096 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-2O95096 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NKX2-2O95096 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NKX2-2O95096 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX2-2O95096 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-2O95096 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-2O95096 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-2O95096 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-2O95096 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX2-2O95096 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms