Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21■□□□□ 0.95
USP1O94782 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP1O94782 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21■□□□□ 0.95
USP1O94782 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21■□□□□ 0.95
USP1O94782 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
USP1O94782 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP1O94782 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21■□□□□ 0.95
USP1O94782 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP1O94782 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP1O94782 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
USP1O94782 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
USP1O94782 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
USP1O94782 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
USP1O94782 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.99■□□□□ 0.95
USP1O94782 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
USP1O94782 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP1O94782 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP1O94782 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.99■□□□□ 0.95
USP1O94782 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP1O94782 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP1O94782 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.99■□□□□ 0.95
USP1O94782 AC105265.2-201ENST00000467189 838 ntBASIC20.99■□□□□ 0.95
USP1O94782 LINC01521-201ENST00000504184 1943 ntBASIC20.99■□□□□ 0.95
USP1O94782 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
USP1O94782 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
USP1O94782 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.98■□□□□ 0.95
USP1O94782 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP1O94782 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP1O94782 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP1O94782 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
USP1O94782 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP1O94782 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP1O94782 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP1O94782 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
USP1O94782 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
USP1O94782 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP1O94782 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP1O94782 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP1O94782 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP1O94782 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
USP1O94782 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP1O94782 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP1O94782 FEM1AP1-201ENST00000431297 1995 ntBASIC20.97■□□□□ 0.95
USP1O94782 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.97■□□□□ 0.95
USP1O94782 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
USP1O94782 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP1O94782 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP1O94782 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
USP1O94782 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.97■□□□□ 0.95
USP1O94782 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP1O94782 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP1O94782 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP1O94782 AC121338.2-201ENST00000622535 1744 ntBASIC20.97■□□□□ 0.95
USP1O94782 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
USP1O94782 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP1O94782 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP1O94782 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP1O94782 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP1O94782 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP1O94782 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP1O94782 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.96■□□□□ 0.95
USP1O94782 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
USP1O94782 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP1O94782 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP1O94782 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP1O94782 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
USP1O94782 ZNRF2P3-201ENST00000424200 374 ntBASIC20.96■□□□□ 0.95
USP1O94782 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.96■□□□□ 0.95
USP1O94782 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP1O94782 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP1O94782 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP1O94782 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP1O94782 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP1O94782 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP1O94782 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
USP1O94782 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
USP1O94782 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
USP1O94782 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
USP1O94782 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP1O94782 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP1O94782 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP1O94782 IRS3P-201ENST00000223076 1006 ntBASIC20.95■□□□□ 0.94
USP1O94782 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP1O94782 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP1O94782 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.95■□□□□ 0.94
USP1O94782 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP1O94782 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP1O94782 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.95■□□□□ 0.94
USP1O94782 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.95■□□□□ 0.94
USP1O94782 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.95■□□□□ 0.94
USP1O94782 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP1O94782 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.95■□□□□ 0.94
USP1O94782 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP1O94782 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.95■□□□□ 0.94
USP1O94782 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
USP1O94782 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP1O94782 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.95■□□□□ 0.94
USP1O94782 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
USP1O94782 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP1O94782 AP004607.4-201ENST00000530158 1459 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms