Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.4■■□□□ 1.82
CACNA1FO60840 AC100791.3-201ENST00000617619 330 ntBASIC26.4■■□□□ 1.82
CACNA1FO60840 AL109923.1-201ENST00000618799 583 ntBASIC26.4■■□□□ 1.82
CACNA1FO60840 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CACNA1FO60840 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.4■■□□□ 1.82
CACNA1FO60840 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC26.4■■□□□ 1.82
CACNA1FO60840 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC26.39■■□□□ 1.82
CACNA1FO60840 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CACNA1FO60840 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CACNA1FO60840 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CACNA1FO60840 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CACNA1FO60840 VMO1-204ENST00000441199 741 ntTSL 2 BASIC26.39■■□□□ 1.82
CACNA1FO60840 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.39■■□□□ 1.82
CACNA1FO60840 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
CACNA1FO60840 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CACNA1FO60840 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CACNA1FO60840 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CACNA1FO60840 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CACNA1FO60840 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC26.38■■□□□ 1.81
CACNA1FO60840 RARRES2P4-201ENST00000514074 484 ntBASIC26.38■■□□□ 1.81
CACNA1FO60840 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC26.38■■□□□ 1.81
CACNA1FO60840 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.38■■□□□ 1.81
CACNA1FO60840 MIR2861-201ENST00000636310 90 ntBASIC26.38■■□□□ 1.81
CACNA1FO60840 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC26.38■■□□□ 1.81
CACNA1FO60840 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CACNA1FO60840 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CACNA1FO60840 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
CACNA1FO60840 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC26.37■■□□□ 1.81
CACNA1FO60840 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CACNA1FO60840 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CACNA1FO60840 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CACNA1FO60840 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CACNA1FO60840 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CACNA1FO60840 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CACNA1FO60840 AC073210.2-201ENST00000430369 194 ntBASIC26.37■■□□□ 1.81
CACNA1FO60840 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.37■■□□□ 1.81
CACNA1FO60840 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.37■■□□□ 1.81
CACNA1FO60840 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.37■■□□□ 1.81
CACNA1FO60840 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.37■■□□□ 1.81
CACNA1FO60840 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CACNA1FO60840 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC26.36■■□□□ 1.81
CACNA1FO60840 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC26.36■■□□□ 1.81
CACNA1FO60840 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.36■■□□□ 1.81
CACNA1FO60840 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CACNA1FO60840 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
CACNA1FO60840 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
CACNA1FO60840 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CACNA1FO60840 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CACNA1FO60840 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC26.35■■□□□ 1.81
CACNA1FO60840 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.35■■□□□ 1.81
CACNA1FO60840 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC26.35■■□□□ 1.81
CACNA1FO60840 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CACNA1FO60840 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CACNA1FO60840 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC26.35■■□□□ 1.81
CACNA1FO60840 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CACNA1FO60840 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC26.35■■□□□ 1.81
CACNA1FO60840 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CACNA1FO60840 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
CACNA1FO60840 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.35■■□□□ 1.81
CACNA1FO60840 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC26.35■■□□□ 1.81
CACNA1FO60840 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CACNA1FO60840 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.35■■□□□ 1.81
CACNA1FO60840 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
CACNA1FO60840 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CACNA1FO60840 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.35■■□□□ 1.81
CACNA1FO60840 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CACNA1FO60840 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CACNA1FO60840 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CACNA1FO60840 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CACNA1FO60840 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
CACNA1FO60840 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CACNA1FO60840 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CACNA1FO60840 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CACNA1FO60840 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC26.34■■□□□ 1.81
CACNA1FO60840 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CACNA1FO60840 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CACNA1FO60840 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC26.34■■□□□ 1.81
CACNA1FO60840 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC26.34■■□□□ 1.81
CACNA1FO60840 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CACNA1FO60840 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC26.33■■□□□ 1.81
CACNA1FO60840 TSPY6P-201ENST00000448518 926 ntBASIC26.33■■□□□ 1.81
CACNA1FO60840 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CACNA1FO60840 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CACNA1FO60840 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CACNA1FO60840 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CACNA1FO60840 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CACNA1FO60840 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
CACNA1FO60840 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CACNA1FO60840 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CACNA1FO60840 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.33■■□□□ 1.8
CACNA1FO60840 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.33■■□□□ 1.8
CACNA1FO60840 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CACNA1FO60840 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
CACNA1FO60840 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CACNA1FO60840 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CACNA1FO60840 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC26.32■■□□□ 1.8
CACNA1FO60840 AL355472.2-201ENST00000422958 438 ntBASIC26.32■■□□□ 1.8
CACNA1FO60840 DUSP5P2-201ENST00000426873 1033 ntBASIC26.32■■□□□ 1.8
CACNA1FO60840 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.32■■□□□ 1.8
CACNA1FO60840 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms