Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PLOD3O60568 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.55■□□□□ 0.72
PLOD3O60568 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.55■□□□□ 0.72
PLOD3O60568 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.55■□□□□ 0.72
PLOD3O60568 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
PLOD3O60568 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.55■□□□□ 0.72
PLOD3O60568 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PLOD3O60568 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.55■□□□□ 0.72
PLOD3O60568 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.54■□□□□ 0.72
PLOD3O60568 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
PLOD3O60568 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.54■□□□□ 0.72
PLOD3O60568 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PLOD3O60568 AC005229.4-201ENST00000610085 2198 ntBASIC19.54■□□□□ 0.72
PLOD3O60568 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PLOD3O60568 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.54■□□□□ 0.72
PLOD3O60568 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PLOD3O60568 AF106564.1-201ENST00000607058 2553 ntBASIC19.54■□□□□ 0.72
PLOD3O60568 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
PLOD3O60568 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PLOD3O60568 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PLOD3O60568 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PLOD3O60568 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PLOD3O60568 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.54■□□□□ 0.72
PLOD3O60568 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PLOD3O60568 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
PLOD3O60568 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PLOD3O60568 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.54■□□□□ 0.72
PLOD3O60568 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.54■□□□□ 0.72
PLOD3O60568 AP001160.3-201ENST00000601484 763 ntBASIC19.54■□□□□ 0.72
PLOD3O60568 AC087623.3-201ENST00000607047 1098 ntBASIC19.54■□□□□ 0.72
PLOD3O60568 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PLOD3O60568 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PLOD3O60568 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PLOD3O60568 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PLOD3O60568 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PLOD3O60568 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PLOD3O60568 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.53■□□□□ 0.72
PLOD3O60568 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
PLOD3O60568 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PLOD3O60568 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PLOD3O60568 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PLOD3O60568 AC026271.2-201ENST00000428091 497 ntBASIC19.53■□□□□ 0.72
PLOD3O60568 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.53■□□□□ 0.72
PLOD3O60568 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PLOD3O60568 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.53■□□□□ 0.72
PLOD3O60568 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.53■□□□□ 0.72
PLOD3O60568 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.53■□□□□ 0.72
PLOD3O60568 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PLOD3O60568 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PLOD3O60568 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PLOD3O60568 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PLOD3O60568 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PLOD3O60568 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PLOD3O60568 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PLOD3O60568 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PLOD3O60568 KRT16P2-201ENST00000414673 1423 ntBASIC19.52■□□□□ 0.72
PLOD3O60568 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PLOD3O60568 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PLOD3O60568 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PLOD3O60568 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PLOD3O60568 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PLOD3O60568 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PLOD3O60568 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PLOD3O60568 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.52■□□□□ 0.72
PLOD3O60568 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.52■□□□□ 0.72
PLOD3O60568 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PLOD3O60568 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.52■□□□□ 0.72
PLOD3O60568 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PLOD3O60568 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.52■□□□□ 0.72
PLOD3O60568 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.52■□□□□ 0.72
PLOD3O60568 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PLOD3O60568 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.52■□□□□ 0.72
PLOD3O60568 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.52■□□□□ 0.72
PLOD3O60568 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.52■□□□□ 0.71
PLOD3O60568 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
PLOD3O60568 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.52■□□□□ 0.71
PLOD3O60568 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.52■□□□□ 0.71
PLOD3O60568 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PLOD3O60568 AL121603.2-201ENST00000557373 2117 ntBASIC19.51■□□□□ 0.71
PLOD3O60568 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PLOD3O60568 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PLOD3O60568 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.51■□□□□ 0.71
PLOD3O60568 KRT19P1-201ENST00000405746 1186 ntBASIC19.51■□□□□ 0.71
PLOD3O60568 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.51■□□□□ 0.71
PLOD3O60568 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.51■□□□□ 0.71
PLOD3O60568 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PLOD3O60568 KRT18P20-201ENST00000548986 1279 ntBASIC19.51■□□□□ 0.71
PLOD3O60568 RARRES2P6-201ENST00000567333 442 ntBASIC19.51■□□□□ 0.71
PLOD3O60568 KRT18P61-201ENST00000585825 1298 ntBASIC19.51■□□□□ 0.71
PLOD3O60568 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PLOD3O60568 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PLOD3O60568 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PLOD3O60568 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PLOD3O60568 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PLOD3O60568 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PLOD3O60568 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PLOD3O60568 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PLOD3O60568 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PLOD3O60568 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PLOD3O60568 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms