Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGA12O60330 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA12O60330 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHGA12O60330 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
PCDHGA12O60330 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA12O60330 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA12O60330 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA12O60330 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA12O60330 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDHGA12O60330 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.6■□□□□ 0.89
PCDHGA12O60330 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHGA12O60330 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.6■□□□□ 0.89
PCDHGA12O60330 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA12O60330 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA12O60330 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA12O60330 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHGA12O60330 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA12O60330 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA12O60330 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA12O60330 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGA12O60330 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGA12O60330 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA12O60330 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA12O60330 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA12O60330 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA12O60330 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA12O60330 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
PCDHGA12O60330 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA12O60330 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDHGA12O60330 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.59■□□□□ 0.89
PCDHGA12O60330 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDHGA12O60330 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDHGA12O60330 AC006058.3-201ENST00000606217 1069 ntBASIC20.59■□□□□ 0.89
PCDHGA12O60330 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGA12O60330 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA12O60330 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGA12O60330 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA12O60330 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA12O60330 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGA12O60330 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGA12O60330 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA12O60330 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA12O60330 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA12O60330 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA12O60330 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA12O60330 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PCDHGA12O60330 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDHGA12O60330 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA12O60330 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PCDHGA12O60330 AC128676.1-201ENST00000454392 318 ntBASIC20.58■□□□□ 0.89
PCDHGA12O60330 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHGA12O60330 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHGA12O60330 AL137060.1-201ENST00000618151 2648 ntBASIC20.58■□□□□ 0.89
PCDHGA12O60330 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.58■□□□□ 0.88
PCDHGA12O60330 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.58■□□□□ 0.88
PCDHGA12O60330 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGA12O60330 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGA12O60330 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PCDHGA12O60330 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGA12O60330 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA12O60330 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA12O60330 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA12O60330 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDHGA12O60330 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
PCDHGA12O60330 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA12O60330 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA12O60330 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PCDHGA12O60330 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.57■□□□□ 0.88
PCDHGA12O60330 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHGA12O60330 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA12O60330 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PCDHGA12O60330 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGA12O60330 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDHGA12O60330 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGA12O60330 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGA12O60330 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA12O60330 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA12O60330 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA12O60330 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGA12O60330 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA12O60330 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA12O60330 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA12O60330 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA12O60330 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA12O60330 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHGA12O60330 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA12O60330 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA12O60330 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.56■□□□□ 0.88
PCDHGA12O60330 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA12O60330 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHGA12O60330 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA12O60330 UNC93B5-201ENST00000530315 699 ntBASIC20.56■□□□□ 0.88
PCDHGA12O60330 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PCDHGA12O60330 AC142381.4-202ENST00000563973 229 ntBASIC20.56■□□□□ 0.88
PCDHGA12O60330 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGA12O60330 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGA12O60330 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA12O60330 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA12O60330 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA12O60330 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms