Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AL162412.1-201ENST00000567129 965 ntBASIC21.17■□□□□ 0.98
KDELR3O43731 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KDELR3O43731 AC005181.1-201ENST00000604782 1256 ntBASIC21.17■□□□□ 0.98
KDELR3O43731 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KDELR3O43731 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KDELR3O43731 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.17■□□□□ 0.98
KDELR3O43731 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
KDELR3O43731 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KDELR3O43731 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDELR3O43731 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.17■□□□□ 0.98
KDELR3O43731 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDELR3O43731 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KDELR3O43731 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDELR3O43731 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.16■□□□□ 0.98
KDELR3O43731 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
KDELR3O43731 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDELR3O43731 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.16■□□□□ 0.98
KDELR3O43731 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.16■□□□□ 0.98
KDELR3O43731 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.16■□□□□ 0.98
KDELR3O43731 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.16■□□□□ 0.98
KDELR3O43731 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KDELR3O43731 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.16■□□□□ 0.98
KDELR3O43731 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDELR3O43731 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
KDELR3O43731 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDELR3O43731 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
KDELR3O43731 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDELR3O43731 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.16■□□□□ 0.98
KDELR3O43731 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDELR3O43731 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDELR3O43731 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.16■□□□□ 0.98
KDELR3O43731 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
KDELR3O43731 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.15■□□□□ 0.98
KDELR3O43731 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KDELR3O43731 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.15■□□□□ 0.98
KDELR3O43731 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDELR3O43731 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDELR3O43731 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDELR3O43731 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.15■□□□□ 0.98
KDELR3O43731 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDELR3O43731 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDELR3O43731 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.15■□□□□ 0.98
KDELR3O43731 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDELR3O43731 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KDELR3O43731 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.15■□□□□ 0.98
KDELR3O43731 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDELR3O43731 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDELR3O43731 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KDELR3O43731 MIR663A-201ENST00000385250 93 ntBASIC21.14■□□□□ 0.97
KDELR3O43731 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.14■□□□□ 0.97
KDELR3O43731 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KDELR3O43731 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KDELR3O43731 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KDELR3O43731 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
KDELR3O43731 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KDELR3O43731 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KDELR3O43731 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
KDELR3O43731 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDELR3O43731 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.13■□□□□ 0.97
KDELR3O43731 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDELR3O43731 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDELR3O43731 AC006970.2-201ENST00000450065 779 ntBASIC21.13■□□□□ 0.97
KDELR3O43731 CDV3P1-201ENST00000471403 739 ntBASIC21.13■□□□□ 0.97
KDELR3O43731 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDELR3O43731 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
KDELR3O43731 AL050303.2-201ENST00000619798 666 ntBASIC21.13■□□□□ 0.97
KDELR3O43731 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDELR3O43731 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDELR3O43731 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDELR3O43731 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDELR3O43731 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDELR3O43731 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.12■□□□□ 0.97
KDELR3O43731 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDELR3O43731 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDELR3O43731 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDELR3O43731 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.12■□□□□ 0.97
KDELR3O43731 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDELR3O43731 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDELR3O43731 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.12■□□□□ 0.97
KDELR3O43731 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDELR3O43731 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
KDELR3O43731 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.12■□□□□ 0.97
KDELR3O43731 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDELR3O43731 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
KDELR3O43731 CYP2T1P-201ENST00000432607 1285 ntBASIC21.12■□□□□ 0.97
KDELR3O43731 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.12■□□□□ 0.97
KDELR3O43731 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.12■□□□□ 0.97
KDELR3O43731 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.12■□□□□ 0.97
KDELR3O43731 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDELR3O43731 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KDELR3O43731 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
KDELR3O43731 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KDELR3O43731 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KDELR3O43731 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.12■□□□□ 0.97
KDELR3O43731 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KDELR3O43731 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDELR3O43731 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
KDELR3O43731 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.12■□□□□ 0.97
KDELR3O43731 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KDELR3O43731 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms