Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 CDV3P1-201ENST00000471403 739 ntBASIC20.81■□□□□ 0.92
TSPAN6O43657 MIR4758-201ENST00000577688 71 ntBASIC20.81■□□□□ 0.92
TSPAN6O43657 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.81■□□□□ 0.92
TSPAN6O43657 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.81■□□□□ 0.92
TSPAN6O43657 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN6O43657 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.8■□□□□ 0.92
TSPAN6O43657 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN6O43657 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN6O43657 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN6O43657 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN6O43657 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN6O43657 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN6O43657 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN6O43657 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN6O43657 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.8■□□□□ 0.92
TSPAN6O43657 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN6O43657 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TSPAN6O43657 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN6O43657 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.8■□□□□ 0.92
TSPAN6O43657 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.8■□□□□ 0.92
TSPAN6O43657 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.8■□□□□ 0.92
TSPAN6O43657 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.8■□□□□ 0.92
TSPAN6O43657 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.8■□□□□ 0.92
TSPAN6O43657 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.8■□□□□ 0.92
TSPAN6O43657 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
TSPAN6O43657 FAM21FP-204ENST00000608637 956 ntBASIC20.8■□□□□ 0.92
TSPAN6O43657 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN6O43657 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN6O43657 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TSPAN6O43657 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.8■□□□□ 0.92
TSPAN6O43657 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN6O43657 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN6O43657 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TSPAN6O43657 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TSPAN6O43657 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.79■□□□□ 0.92
TSPAN6O43657 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.79■□□□□ 0.92
TSPAN6O43657 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
TSPAN6O43657 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.79■□□□□ 0.92
TSPAN6O43657 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.79■□□□□ 0.92
TSPAN6O43657 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.79■□□□□ 0.92
TSPAN6O43657 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TSPAN6O43657 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TSPAN6O43657 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.78■□□□□ 0.92
TSPAN6O43657 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.78■□□□□ 0.92
TSPAN6O43657 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN6O43657 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN6O43657 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN6O43657 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN6O43657 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN6O43657 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN6O43657 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN6O43657 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN6O43657 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN6O43657 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.78■□□□□ 0.92
TSPAN6O43657 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN6O43657 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.78■□□□□ 0.92
TSPAN6O43657 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN6O43657 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.78■□□□□ 0.92
TSPAN6O43657 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN6O43657 AC010980.2-201ENST00000587099 1412 ntBASIC20.78■□□□□ 0.92
TSPAN6O43657 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN6O43657 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.77■□□□□ 0.92
TSPAN6O43657 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN6O43657 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN6O43657 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TSPAN6O43657 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.77■□□□□ 0.92
TSPAN6O43657 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN6O43657 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.77■□□□□ 0.92
TSPAN6O43657 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.77■□□□□ 0.92
TSPAN6O43657 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN6O43657 AC244015.2-201ENST00000616358 1861 ntBASIC20.77■□□□□ 0.92
TSPAN6O43657 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.77■□□□□ 0.91
TSPAN6O43657 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
TSPAN6O43657 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.76■□□□□ 0.91
TSPAN6O43657 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.76■□□□□ 0.91
TSPAN6O43657 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.76■□□□□ 0.91
TSPAN6O43657 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.76■□□□□ 0.91
TSPAN6O43657 AC092118.2-201ENST00000613495 667 ntBASIC20.76■□□□□ 0.91
TSPAN6O43657 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN6O43657 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN6O43657 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TSPAN6O43657 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN6O43657 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN6O43657 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN6O43657 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TSPAN6O43657 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN6O43657 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TSPAN6O43657 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN6O43657 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
TSPAN6O43657 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.75■□□□□ 0.91
TSPAN6O43657 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TSPAN6O43657 BX276092.2-201ENST00000417668 665 ntBASIC20.75■□□□□ 0.91
TSPAN6O43657 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.75■□□□□ 0.91
TSPAN6O43657 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.75■□□□□ 0.91
TSPAN6O43657 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.75■□□□□ 0.91
TSPAN6O43657 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.75■□□□□ 0.91
TSPAN6O43657 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN6O43657 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN6O43657 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN6O43657 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms