Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNAI2O43623 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNAI2O43623 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
SNAI2O43623 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNAI2O43623 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SNAI2O43623 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNAI2O43623 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SNAI2O43623 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNAI2O43623 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
SNAI2O43623 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNAI2O43623 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SNAI2O43623 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SNAI2O43623 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNAI2O43623 TSPY9P-201ENST00000440215 945 ntBASIC15.47■□□□□ 0.07
SNAI2O43623 TSPY11P-201ENST00000442607 1045 ntBASIC15.47■□□□□ 0.07
SNAI2O43623 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNAI2O43623 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
SNAI2O43623 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNAI2O43623 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNAI2O43623 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.47■□□□□ 0.07
SNAI2O43623 AC003102.1-202ENST00000563394 1796 ntBASIC15.47■□□□□ 0.07
SNAI2O43623 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNAI2O43623 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.46■□□□□ 0.07
SNAI2O43623 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNAI2O43623 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNAI2O43623 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
SNAI2O43623 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
SNAI2O43623 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
SNAI2O43623 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNAI2O43623 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
SNAI2O43623 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNAI2O43623 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
SNAI2O43623 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNAI2O43623 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNAI2O43623 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
SNAI2O43623 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNAI2O43623 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.46■□□□□ 0.07
SNAI2O43623 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.46■□□□□ 0.07
SNAI2O43623 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SNAI2O43623 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNAI2O43623 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNAI2O43623 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.46■□□□□ 0.07
SNAI2O43623 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNAI2O43623 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNAI2O43623 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.46■□□□□ 0.07
SNAI2O43623 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNAI2O43623 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
SNAI2O43623 GABARAPL3-202ENST00000624044 1851 ntBASIC15.46■□□□□ 0.06
SNAI2O43623 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SNAI2O43623 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.45■□□□□ 0.06
SNAI2O43623 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SNAI2O43623 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SNAI2O43623 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.45■□□□□ 0.06
SNAI2O43623 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
SNAI2O43623 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SNAI2O43623 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SNAI2O43623 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SNAI2O43623 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SNAI2O43623 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SNAI2O43623 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SNAI2O43623 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SNAI2O43623 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SNAI2O43623 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SNAI2O43623 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.44■□□□□ 0.06
SNAI2O43623 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SNAI2O43623 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SNAI2O43623 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SNAI2O43623 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
SNAI2O43623 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.44■□□□□ 0.06
SNAI2O43623 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.44■□□□□ 0.06
SNAI2O43623 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SNAI2O43623 AC239859.2-201ENST00000444165 318 ntBASIC15.44■□□□□ 0.06
SNAI2O43623 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
SNAI2O43623 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SNAI2O43623 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SNAI2O43623 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SNAI2O43623 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
SNAI2O43623 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.44■□□□□ 0.06
SNAI2O43623 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SNAI2O43623 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.43■□□□□ 0.06
SNAI2O43623 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SNAI2O43623 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms