Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
MSH4O15457 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
MSH4O15457 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
MSH4O15457 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
MSH4O15457 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.45■■□□□ 1.34
MSH4O15457 AL162412.1-201ENST00000567129 965 ntBASIC23.45■■□□□ 1.34
MSH4O15457 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
MSH4O15457 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.45■■□□□ 1.34
MSH4O15457 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
MSH4O15457 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
MSH4O15457 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
MSH4O15457 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.45■■□□□ 1.34
MSH4O15457 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
MSH4O15457 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
MSH4O15457 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.44■■□□□ 1.34
MSH4O15457 ID1-201ENST00000376105 1233 ntBASIC23.44■■□□□ 1.34
MSH4O15457 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.44■■□□□ 1.34
MSH4O15457 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.44■■□□□ 1.34
MSH4O15457 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
MSH4O15457 AC133552.2-202ENST00000575694 574 ntBASIC23.44■■□□□ 1.34
MSH4O15457 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
MSH4O15457 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
MSH4O15457 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.44■■□□□ 1.34
MSH4O15457 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
MSH4O15457 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.44■■□□□ 1.34
MSH4O15457 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
MSH4O15457 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
MSH4O15457 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
MSH4O15457 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
MSH4O15457 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.43■■□□□ 1.34
MSH4O15457 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.43■■□□□ 1.34
MSH4O15457 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
MSH4O15457 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
MSH4O15457 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
MSH4O15457 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
MSH4O15457 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
MSH4O15457 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
MSH4O15457 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.43■■□□□ 1.34
MSH4O15457 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.43■■□□□ 1.34
MSH4O15457 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
MSH4O15457 HLA-L-209ENST00000420110 1011 ntBASIC23.43■■□□□ 1.34
MSH4O15457 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.43■■□□□ 1.34
MSH4O15457 AC083906.2-201ENST00000511578 360 ntBASIC23.43■■□□□ 1.34
MSH4O15457 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.43■■□□□ 1.34
MSH4O15457 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
MSH4O15457 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
MSH4O15457 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
MSH4O15457 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
MSH4O15457 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
MSH4O15457 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.42■■□□□ 1.34
MSH4O15457 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
MSH4O15457 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.42■■□□□ 1.34
MSH4O15457 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
MSH4O15457 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.42■■□□□ 1.34
MSH4O15457 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.42■■□□□ 1.34
MSH4O15457 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
MSH4O15457 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
MSH4O15457 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.42■■□□□ 1.34
MSH4O15457 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.42■■□□□ 1.34
MSH4O15457 AL121832.2-201ENST00000610979 668 ntBASIC23.42■■□□□ 1.34
MSH4O15457 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
MSH4O15457 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.42■■□□□ 1.34
MSH4O15457 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
MSH4O15457 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
MSH4O15457 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MSH4O15457 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MSH4O15457 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
MSH4O15457 GPX1P1-201ENST00000388829 606 ntBASIC23.41■■□□□ 1.34
MSH4O15457 AC104771.1-201ENST00000603335 964 ntBASIC23.41■■□□□ 1.34
MSH4O15457 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.41■■□□□ 1.34
MSH4O15457 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
MSH4O15457 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.41■■□□□ 1.34
MSH4O15457 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MSH4O15457 AF106564.1-201ENST00000607058 2553 ntBASIC23.41■■□□□ 1.34
MSH4O15457 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MSH4O15457 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MSH4O15457 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
MSH4O15457 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
MSH4O15457 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.4■■□□□ 1.34
MSH4O15457 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
MSH4O15457 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
MSH4O15457 GUSBP6-202ENST00000438529 1198 ntBASIC23.4■■□□□ 1.34
MSH4O15457 AC093787.1-201ENST00000450396 207 ntBASIC23.4■■□□□ 1.34
MSH4O15457 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.4■■□□□ 1.34
MSH4O15457 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.4■■□□□ 1.34
MSH4O15457 RARRES2P4-201ENST00000514074 484 ntBASIC23.4■■□□□ 1.34
MSH4O15457 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.4■■□□□ 1.34
MSH4O15457 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MSH4O15457 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.4■■□□□ 1.34
MSH4O15457 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.4■■□□□ 1.34
MSH4O15457 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MSH4O15457 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
MSH4O15457 AL049796.1-201ENST00000565336 1766 ntBASIC23.4■■□□□ 1.34
MSH4O15457 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.34
MSH4O15457 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.39■■□□□ 1.34
MSH4O15457 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
MSH4O15457 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
MSH4O15457 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
MSH4O15457 AF201337.1-201ENST00000520239 748 ntBASIC23.39■■□□□ 1.33
MSH4O15457 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.39■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms