Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC23.07■■□□□ 1.28
TNRC18O15417 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
TNRC18O15417 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.07■■□□□ 1.28
TNRC18O15417 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TNRC18O15417 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC23.06■■□□□ 1.28
TNRC18O15417 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
TNRC18O15417 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.06■■□□□ 1.28
TNRC18O15417 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TNRC18O15417 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.06■■□□□ 1.28
TNRC18O15417 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.06■■□□□ 1.28
TNRC18O15417 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TNRC18O15417 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TNRC18O15417 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TNRC18O15417 FAM197Y1-201ENST00000421178 764 ntBASIC23.06■■□□□ 1.28
TNRC18O15417 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.06■■□□□ 1.28
TNRC18O15417 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.06■■□□□ 1.28
TNRC18O15417 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.06■■□□□ 1.28
TNRC18O15417 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
TNRC18O15417 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
TNRC18O15417 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TNRC18O15417 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
TNRC18O15417 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC23.05■■□□□ 1.28
TNRC18O15417 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
TNRC18O15417 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TNRC18O15417 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TNRC18O15417 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.05■■□□□ 1.28
TNRC18O15417 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
TNRC18O15417 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
TNRC18O15417 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TNRC18O15417 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TNRC18O15417 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC23.04■■□□□ 1.28
TNRC18O15417 MIR1238-201ENST00000408483 83 ntBASIC23.04■■□□□ 1.28
TNRC18O15417 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
TNRC18O15417 AC120498.10-201ENST00000621827 505 ntBASIC23.04■■□□□ 1.28
TNRC18O15417 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
TNRC18O15417 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TNRC18O15417 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TNRC18O15417 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.04■■□□□ 1.28
TNRC18O15417 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.04■■□□□ 1.28
TNRC18O15417 DBP-204ENST00000599385 709 ntTSL 3 BASIC23.04■■□□□ 1.28
TNRC18O15417 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNRC18O15417 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TNRC18O15417 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.03■■□□□ 1.28
TNRC18O15417 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.03■■□□□ 1.28
TNRC18O15417 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TNRC18O15417 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.03■■□□□ 1.28
TNRC18O15417 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNRC18O15417 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TNRC18O15417 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC23.03■■□□□ 1.28
TNRC18O15417 AP006587.3-201ENST00000525742 1516 ntBASIC23.03■■□□□ 1.28
TNRC18O15417 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNRC18O15417 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TNRC18O15417 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNRC18O15417 AK4P3-201ENST00000418260 669 ntBASIC23.03■■□□□ 1.28
TNRC18O15417 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TNRC18O15417 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNRC18O15417 AC093458.2-201ENST00000623150 629 ntBASIC23.03■■□□□ 1.28
TNRC18O15417 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNRC18O15417 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
TNRC18O15417 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.03■■□□□ 1.28
TNRC18O15417 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TNRC18O15417 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TNRC18O15417 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC23.02■■□□□ 1.28
TNRC18O15417 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.02■■□□□ 1.28
TNRC18O15417 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TNRC18O15417 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.02■■□□□ 1.28
TNRC18O15417 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TNRC18O15417 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
TNRC18O15417 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
TNRC18O15417 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TNRC18O15417 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNRC18O15417 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNRC18O15417 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.01■■□□□ 1.27
TNRC18O15417 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
TNRC18O15417 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TNRC18O15417 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TNRC18O15417 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNRC18O15417 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TNRC18O15417 FAM8A6P-201ENST00000407496 1135 ntBASIC23.01■■□□□ 1.27
TNRC18O15417 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
TNRC18O15417 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.01■■□□□ 1.27
TNRC18O15417 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.01■■□□□ 1.27
TNRC18O15417 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.01■■□□□ 1.27
TNRC18O15417 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC23.01■■□□□ 1.27
TNRC18O15417 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
TNRC18O15417 MED25-212ENST00000618715 1467 ntTSL 5 BASIC23.01■■□□□ 1.27
TNRC18O15417 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.01■■□□□ 1.27
TNRC18O15417 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC23.01■■□□□ 1.27
TNRC18O15417 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TNRC18O15417 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.01■■□□□ 1.27
TNRC18O15417 AC243732.1-201ENST00000612648 864 ntBASIC23.01■■□□□ 1.27
TNRC18O15417 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TNRC18O15417 KRT8P10-201ENST00000450021 1447 ntBASIC23■■□□□ 1.27
TNRC18O15417 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TNRC18O15417 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TNRC18O15417 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
TNRC18O15417 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23■■□□□ 1.27
TNRC18O15417 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC23■■□□□ 1.27
TNRC18O15417 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TNRC18O15417 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms