Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPTLC1O15269 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
SPTLC1O15269 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SPTLC1O15269 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPTLC1O15269 AL162412.1-201ENST00000567129 965 ntBASIC22.3■■□□□ 1.16
SPTLC1O15269 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.3■■□□□ 1.16
SPTLC1O15269 OR10C1-204ENST00000622521 1039 ntBASIC22.3■■□□□ 1.16
SPTLC1O15269 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SPTLC1O15269 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPTLC1O15269 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
SPTLC1O15269 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SPTLC1O15269 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPTLC1O15269 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SPTLC1O15269 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SPTLC1O15269 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPTLC1O15269 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPTLC1O15269 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
SPTLC1O15269 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SPTLC1O15269 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPTLC1O15269 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SPTLC1O15269 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPTLC1O15269 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
SPTLC1O15269 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.29■■□□□ 1.16
SPTLC1O15269 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.29■■□□□ 1.16
SPTLC1O15269 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SPTLC1O15269 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.29■■□□□ 1.16
SPTLC1O15269 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SPTLC1O15269 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
SPTLC1O15269 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.28■■□□□ 1.16
SPTLC1O15269 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SPTLC1O15269 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPTLC1O15269 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.28■■□□□ 1.16
SPTLC1O15269 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPTLC1O15269 RARRES2P4-201ENST00000514074 484 ntBASIC22.28■■□□□ 1.16
SPTLC1O15269 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.28■■□□□ 1.16
SPTLC1O15269 AC098934.4-201ENST00000564127 592 ntBASIC22.28■■□□□ 1.16
SPTLC1O15269 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.28■■□□□ 1.16
SPTLC1O15269 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SPTLC1O15269 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SPTLC1O15269 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPTLC1O15269 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SPTLC1O15269 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SPTLC1O15269 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPTLC1O15269 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPTLC1O15269 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
SPTLC1O15269 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.28■■□□□ 1.16
SPTLC1O15269 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SPTLC1O15269 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.28■■□□□ 1.16
SPTLC1O15269 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPTLC1O15269 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPTLC1O15269 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SPTLC1O15269 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.27■■□□□ 1.16
SPTLC1O15269 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.27■■□□□ 1.16
SPTLC1O15269 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
SPTLC1O15269 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.27■■□□□ 1.16
SPTLC1O15269 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SPTLC1O15269 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPTLC1O15269 AC069236.1-201ENST00000604339 616 ntBASIC22.27■■□□□ 1.16
SPTLC1O15269 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.27■■□□□ 1.16
SPTLC1O15269 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
SPTLC1O15269 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPTLC1O15269 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPTLC1O15269 Z98882.1-201ENST00000622160 2253 ntBASIC22.27■■□□□ 1.16
SPTLC1O15269 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SPTLC1O15269 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.27■■□□□ 1.15
SPTLC1O15269 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
SPTLC1O15269 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.27■■□□□ 1.15
SPTLC1O15269 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.26■■□□□ 1.15
SPTLC1O15269 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPTLC1O15269 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPTLC1O15269 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SPTLC1O15269 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SPTLC1O15269 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPTLC1O15269 SLC29A4P1-201ENST00000398760 971 ntBASIC22.26■■□□□ 1.15
SPTLC1O15269 AL512625.2-201ENST00000417533 625 ntBASIC22.26■■□□□ 1.15
SPTLC1O15269 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.26■■□□□ 1.15
SPTLC1O15269 KRT18P6-201ENST00000555540 1265 ntBASIC22.26■■□□□ 1.15
SPTLC1O15269 AC008694.1-202ENST00000636953 945 ntBASIC22.26■■□□□ 1.15
SPTLC1O15269 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPTLC1O15269 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPTLC1O15269 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
SPTLC1O15269 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
SPTLC1O15269 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
SPTLC1O15269 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPTLC1O15269 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPTLC1O15269 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.25■■□□□ 1.15
SPTLC1O15269 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.25■■□□□ 1.15
SPTLC1O15269 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPTLC1O15269 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPTLC1O15269 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPTLC1O15269 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPTLC1O15269 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPTLC1O15269 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.25■■□□□ 1.15
SPTLC1O15269 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.25■■□□□ 1.15
SPTLC1O15269 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
SPTLC1O15269 LINC00565-201ENST00000562710 2331 ntBASIC22.25■■□□□ 1.15
SPTLC1O15269 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPTLC1O15269 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.25■■□□□ 1.15
SPTLC1O15269 MKRN4P-201ENST00000444706 1521 ntBASIC22.25■■□□□ 1.15
SPTLC1O15269 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms