Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 MFF-205ENST00000354503 1085 ntTSL 2 BASIC29.64■■■□□ 2.34
VGFO15240 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
VGFO15240 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC29.64■■■□□ 2.34
VGFO15240 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
VGFO15240 KRT17P3-201ENST00000420566 1262 ntBASIC29.64■■■□□ 2.34
VGFO15240 HES2-205ENST00000487437 968 ntTSL 3 BASIC29.64■■■□□ 2.34
VGFO15240 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC29.64■■■□□ 2.34
VGFO15240 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
VGFO15240 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC29.64■■■□□ 2.34
VGFO15240 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC29.64■■■□□ 2.34
VGFO15240 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
VGFO15240 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
VGFO15240 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
VGFO15240 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
VGFO15240 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
VGFO15240 SLC29A4P2-201ENST00000504749 1089 ntBASIC29.63■■■□□ 2.33
VGFO15240 RPPH1-201ENST00000516869 333 ntBASIC29.63■■■□□ 2.33
VGFO15240 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC29.63■■■□□ 2.33
VGFO15240 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC29.63■■■□□ 2.33
VGFO15240 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
VGFO15240 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
VGFO15240 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC29.62■■■□□ 2.33
VGFO15240 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
VGFO15240 RN7SL471P-201ENST00000580476 299 ntBASIC29.62■■■□□ 2.33
VGFO15240 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC29.62■■■□□ 2.33
VGFO15240 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC29.62■■■□□ 2.33
VGFO15240 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
VGFO15240 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
VGFO15240 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC29.61■■■□□ 2.33
VGFO15240 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC29.61■■■□□ 2.33
VGFO15240 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
VGFO15240 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
VGFO15240 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC29.61■■■□□ 2.33
VGFO15240 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
VGFO15240 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
VGFO15240 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC29.61■■■□□ 2.33
VGFO15240 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
VGFO15240 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
VGFO15240 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
VGFO15240 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC29.6■■■□□ 2.33
VGFO15240 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC29.6■■■□□ 2.33
VGFO15240 OR2A1-AS1-207ENST00000486094 819 ntBASIC29.6■■■□□ 2.33
VGFO15240 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC29.6■■■□□ 2.33
VGFO15240 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
VGFO15240 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
VGFO15240 AC105020.6-201ENST00000621523 1217 ntBASIC29.6■■■□□ 2.33
VGFO15240 CRK-204ENST00000574295 1391 ntTSL 5 BASIC29.6■■■□□ 2.33
VGFO15240 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
VGFO15240 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
VGFO15240 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC29.6■■■□□ 2.33
VGFO15240 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
VGFO15240 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
VGFO15240 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
VGFO15240 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC29.59■■■□□ 2.33
VGFO15240 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC29.59■■■□□ 2.33
VGFO15240 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC29.59■■■□□ 2.33
VGFO15240 REXO2-208ENST00000539754 791 ntTSL 2 BASIC29.59■■■□□ 2.33
VGFO15240 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC29.59■■■□□ 2.33
VGFO15240 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
VGFO15240 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
VGFO15240 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC29.59■■■□□ 2.33
VGFO15240 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
VGFO15240 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
VGFO15240 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
VGFO15240 AC116050.2-201ENST00000612102 1779 ntBASIC29.59■■■□□ 2.33
VGFO15240 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
VGFO15240 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
VGFO15240 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
VGFO15240 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
VGFO15240 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
VGFO15240 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
VGFO15240 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
VGFO15240 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC29.58■■■□□ 2.33
VGFO15240 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC29.58■■■□□ 2.33
VGFO15240 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC29.58■■■□□ 2.33
VGFO15240 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC29.58■■■□□ 2.33
VGFO15240 C1QBPP2-201ENST00000528754 825 ntBASIC29.58■■■□□ 2.33
VGFO15240 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
VGFO15240 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC29.58■■■□□ 2.33
VGFO15240 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC29.58■■■□□ 2.33
VGFO15240 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC29.58■■■□□ 2.33
VGFO15240 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC29.58■■■□□ 2.33
VGFO15240 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC29.58■■■□□ 2.33
VGFO15240 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC29.58■■■□□ 2.33
VGFO15240 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC29.58■■■□□ 2.33
VGFO15240 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
VGFO15240 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
VGFO15240 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC29.57■■■□□ 2.32
VGFO15240 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
VGFO15240 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
VGFO15240 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
VGFO15240 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC29.57■■■□□ 2.32
VGFO15240 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
VGFO15240 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
VGFO15240 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
VGFO15240 SOX15-203ENST00000570788 1093 ntBASIC29.57■■■□□ 2.32
VGFO15240 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
VGFO15240 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
VGFO15240 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
VGFO15240 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms