Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC027702.1-201ENST00000563810 1770 ntBASIC19.93■□□□□ 0.78
CACNA1AO00555 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CACNA1AO00555 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNA1AO00555 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.93■□□□□ 0.78
CACNA1AO00555 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.93■□□□□ 0.78
CACNA1AO00555 FAM8A6P-201ENST00000407496 1135 ntBASIC19.93■□□□□ 0.78
CACNA1AO00555 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.93■□□□□ 0.78
CACNA1AO00555 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.93■□□□□ 0.78
CACNA1AO00555 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.93■□□□□ 0.78
CACNA1AO00555 FAM21FP-204ENST00000608637 956 ntBASIC19.93■□□□□ 0.78
CACNA1AO00555 AL691432.3-201ENST00000621860 400 ntBASIC19.93■□□□□ 0.78
CACNA1AO00555 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNA1AO00555 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CACNA1AO00555 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNA1AO00555 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.93■□□□□ 0.78
CACNA1AO00555 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.93■□□□□ 0.78
CACNA1AO00555 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1AO00555 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1AO00555 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.92■□□□□ 0.78
CACNA1AO00555 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.92■□□□□ 0.78
CACNA1AO00555 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.92■□□□□ 0.78
CACNA1AO00555 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CACNA1AO00555 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.92■□□□□ 0.78
CACNA1AO00555 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CACNA1AO00555 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.92■□□□□ 0.78
CACNA1AO00555 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CACNA1AO00555 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1AO00555 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1AO00555 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1AO00555 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1AO00555 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.92■□□□□ 0.78
CACNA1AO00555 AC008175.2-201ENST00000612840 297 ntBASIC19.92■□□□□ 0.78
CACNA1AO00555 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1AO00555 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
CACNA1AO00555 AL390955.1-201ENST00000428694 934 ntBASIC19.91■□□□□ 0.78
CACNA1AO00555 HCG4P8-203ENST00000443049 980 ntBASIC19.91■□□□□ 0.78
CACNA1AO00555 FDX1P1-201ENST00000449115 551 ntBASIC19.91■□□□□ 0.78
CACNA1AO00555 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.91■□□□□ 0.78
CACNA1AO00555 FITM1-202ENST00000559294 800 ntBASIC19.91■□□□□ 0.78
CACNA1AO00555 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.91■□□□□ 0.78
CACNA1AO00555 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
CACNA1AO00555 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CACNA1AO00555 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1AO00555 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1AO00555 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1AO00555 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.91■□□□□ 0.78
CACNA1AO00555 AK4P3-201ENST00000418260 669 ntBASIC19.91■□□□□ 0.78
CACNA1AO00555 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.91■□□□□ 0.78
CACNA1AO00555 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.91■□□□□ 0.78
CACNA1AO00555 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1AO00555 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.91■□□□□ 0.78
CACNA1AO00555 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.91■□□□□ 0.78
CACNA1AO00555 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CACNA1AO00555 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1AO00555 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.9■□□□□ 0.78
CACNA1AO00555 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.9■□□□□ 0.78
CACNA1AO00555 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1AO00555 FAM197Y1-201ENST00000421178 764 ntBASIC19.9■□□□□ 0.78
CACNA1AO00555 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1AO00555 AL034346.1-201ENST00000568244 1277 ntBASIC19.9■□□□□ 0.78
CACNA1AO00555 AC073195.1-201ENST00000607241 877 ntBASIC19.9■□□□□ 0.78
CACNA1AO00555 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1AO00555 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CACNA1AO00555 AL353803.4-201ENST00000565882 1934 ntBASIC19.9■□□□□ 0.78
CACNA1AO00555 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1AO00555 AL353807.1-201ENST00000427475 662 ntBASIC19.9■□□□□ 0.78
CACNA1AO00555 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CACNA1AO00555 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.89■□□□□ 0.78
CACNA1AO00555 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.89■□□□□ 0.78
CACNA1AO00555 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1AO00555 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.89■□□□□ 0.77
CACNA1AO00555 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1AO00555 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1AO00555 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.89■□□□□ 0.77
CACNA1AO00555 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.89■□□□□ 0.77
CACNA1AO00555 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CACNA1AO00555 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.89■□□□□ 0.77
CACNA1AO00555 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.89■□□□□ 0.77
CACNA1AO00555 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1AO00555 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.89■□□□□ 0.77
CACNA1AO00555 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1AO00555 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
CACNA1AO00555 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.89■□□□□ 0.77
CACNA1AO00555 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CACNA1AO00555 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1AO00555 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CACNA1AO00555 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1AO00555 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1AO00555 UNC93B2-201ENST00000285383 730 ntBASIC19.88■□□□□ 0.77
CACNA1AO00555 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.88■□□□□ 0.77
CACNA1AO00555 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1AO00555 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1AO00555 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1AO00555 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.88■□□□□ 0.77
CACNA1AO00555 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1AO00555 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1AO00555 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.87■□□□□ 0.77
CACNA1AO00555 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1AO00555 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.87■□□□□ 0.77
CACNA1AO00555 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms