Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK1AO00322 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.71■□□□□ 0.75
UPK1AO00322 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.71■□□□□ 0.75
UPK1AO00322 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
UPK1AO00322 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.71■□□□□ 0.75
UPK1AO00322 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.71■□□□□ 0.75
UPK1AO00322 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK1AO00322 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK1AO00322 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1AO00322 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1AO00322 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.7■□□□□ 0.74
UPK1AO00322 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1AO00322 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1AO00322 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.7■□□□□ 0.74
UPK1AO00322 AC073314.1-201ENST00000568729 2216 ntBASIC19.7■□□□□ 0.74
UPK1AO00322 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UPK1AO00322 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UPK1AO00322 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1AO00322 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.7■□□□□ 0.74
UPK1AO00322 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.7■□□□□ 0.74
UPK1AO00322 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1AO00322 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1AO00322 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.7■□□□□ 0.74
UPK1AO00322 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.7■□□□□ 0.74
UPK1AO00322 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1AO00322 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1AO00322 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.7■□□□□ 0.74
UPK1AO00322 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.7■□□□□ 0.74
UPK1AO00322 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.7■□□□□ 0.74
UPK1AO00322 LINC02228-203ENST00000641970 1355 ntBASIC19.7■□□□□ 0.74
UPK1AO00322 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1AO00322 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1AO00322 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UPK1AO00322 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1AO00322 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1AO00322 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.69■□□□□ 0.74
UPK1AO00322 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
UPK1AO00322 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.69■□□□□ 0.74
UPK1AO00322 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1AO00322 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1AO00322 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.69■□□□□ 0.74
UPK1AO00322 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.69■□□□□ 0.74
UPK1AO00322 EEF1DP3-203ENST00000566025 782 ntBASIC19.69■□□□□ 0.74
UPK1AO00322 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1AO00322 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1AO00322 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1AO00322 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.69■□□□□ 0.74
UPK1AO00322 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1AO00322 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
UPK1AO00322 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1AO00322 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1AO00322 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1AO00322 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.69■□□□□ 0.74
UPK1AO00322 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPK1AO00322 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPK1AO00322 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPK1AO00322 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
UPK1AO00322 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPK1AO00322 AC123595.1-201ENST00000440769 1046 ntBASIC19.68■□□□□ 0.74
UPK1AO00322 YBX1P1-201ENST00000445822 960 ntBASIC19.68■□□□□ 0.74
UPK1AO00322 AC079140.4-201ENST00000507448 529 ntBASIC19.68■□□□□ 0.74
UPK1AO00322 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.68■□□□□ 0.74
UPK1AO00322 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.68■□□□□ 0.74
UPK1AO00322 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.68■□□□□ 0.74
UPK1AO00322 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.68■□□□□ 0.74
UPK1AO00322 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPK1AO00322 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
UPK1AO00322 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.67■□□□□ 0.74
UPK1AO00322 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPK1AO00322 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
UPK1AO00322 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UPK1AO00322 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
UPK1AO00322 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.67■□□□□ 0.74
UPK1AO00322 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.67■□□□□ 0.74
UPK1AO00322 AC053503.5-201ENST00000601508 636 ntBASIC19.67■□□□□ 0.74
UPK1AO00322 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPK1AO00322 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.67■□□□□ 0.74
UPK1AO00322 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPK1AO00322 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
UPK1AO00322 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.67■□□□□ 0.74
UPK1AO00322 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1AO00322 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1AO00322 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1AO00322 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.66■□□□□ 0.74
UPK1AO00322 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1AO00322 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1AO00322 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1AO00322 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1AO00322 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1AO00322 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1AO00322 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1AO00322 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1AO00322 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1AO00322 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.66■□□□□ 0.74
UPK1AO00322 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1AO00322 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.66■□□□□ 0.74
UPK1AO00322 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.66■□□□□ 0.74
UPK1AO00322 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.66■□□□□ 0.74
UPK1AO00322 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1AO00322 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms