Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PDLIM1O00151 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PDLIM1O00151 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PDLIM1O00151 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM1O00151 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDLIM1O00151 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM1O00151 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.7■□□□□ 0.74
PDLIM1O00151 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM1O00151 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PDLIM1O00151 OR7E47P-201ENST00000546390 1422 ntBASIC19.7■□□□□ 0.74
PDLIM1O00151 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM1O00151 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
PDLIM1O00151 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM1O00151 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM1O00151 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM1O00151 UNC93B3-201ENST00000308076 687 ntBASIC19.7■□□□□ 0.74
PDLIM1O00151 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM1O00151 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.7■□□□□ 0.74
PDLIM1O00151 AC006455.2-201ENST00000429931 906 ntBASIC19.7■□□□□ 0.74
PDLIM1O00151 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.7■□□□□ 0.74
PDLIM1O00151 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.7■□□□□ 0.74
PDLIM1O00151 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDLIM1O00151 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.7■□□□□ 0.74
PDLIM1O00151 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.7■□□□□ 0.74
PDLIM1O00151 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PDLIM1O00151 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.7■□□□□ 0.74
PDLIM1O00151 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.69■□□□□ 0.74
PDLIM1O00151 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PDLIM1O00151 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.69■□□□□ 0.74
PDLIM1O00151 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM1O00151 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM1O00151 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM1O00151 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.69■□□□□ 0.74
PDLIM1O00151 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.69■□□□□ 0.74
PDLIM1O00151 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM1O00151 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.69■□□□□ 0.74
PDLIM1O00151 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM1O00151 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.69■□□□□ 0.74
PDLIM1O00151 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM1O00151 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PDLIM1O00151 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM1O00151 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PDLIM1O00151 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.69■□□□□ 0.74
PDLIM1O00151 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM1O00151 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM1O00151 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM1O00151 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM1O00151 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM1O00151 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM1O00151 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PDLIM1O00151 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM1O00151 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM1O00151 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PDLIM1O00151 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM1O00151 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM1O00151 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM1O00151 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM1O00151 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.68■□□□□ 0.74
PDLIM1O00151 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PDLIM1O00151 SERBP1P1-201ENST00000396021 1160 ntBASIC19.68■□□□□ 0.74
PDLIM1O00151 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.68■□□□□ 0.74
PDLIM1O00151 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.68■□□□□ 0.74
PDLIM1O00151 AL138724.1-201ENST00000606771 1088 ntBASIC19.68■□□□□ 0.74
PDLIM1O00151 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM1O00151 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM1O00151 SYT6-210ENST00000641643 1587 ntBASIC19.68■□□□□ 0.74
PDLIM1O00151 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.68■□□□□ 0.74
PDLIM1O00151 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM1O00151 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.68■□□□□ 0.74
PDLIM1O00151 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.68■□□□□ 0.74
PDLIM1O00151 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.68■□□□□ 0.74
PDLIM1O00151 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.68■□□□□ 0.74
PDLIM1O00151 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM1O00151 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.68■□□□□ 0.74
PDLIM1O00151 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM1O00151 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM1O00151 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM1O00151 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM1O00151 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
PDLIM1O00151 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM1O00151 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
PDLIM1O00151 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM1O00151 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM1O00151 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
PDLIM1O00151 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM1O00151 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM1O00151 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM1O00151 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM1O00151 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PDLIM1O00151 AL031602.1-201ENST00000633169 911 ntBASIC19.67■□□□□ 0.74
PDLIM1O00151 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM1O00151 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.67■□□□□ 0.74
PDLIM1O00151 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PDLIM1O00151 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM1O00151 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.67■□□□□ 0.74
PDLIM1O00151 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM1O00151 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM1O00151 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM1O00151 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM1O00151 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms