Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L5A6NJ08 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L5A6NJ08 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.37■□□□□ 0.53
MBD3L5A6NJ08 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L5A6NJ08 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L5A6NJ08 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD3L5A6NJ08 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD3L5A6NJ08 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD3L5A6NJ08 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD3L5A6NJ08 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MBD3L5A6NJ08 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.36■□□□□ 0.53
MBD3L5A6NJ08 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MBD3L5A6NJ08 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
MBD3L5A6NJ08 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
MBD3L5A6NJ08 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD3L5A6NJ08 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MBD3L5A6NJ08 ITM2C-210ENST00000620962 501 ntBASIC18.36■□□□□ 0.53
MBD3L5A6NJ08 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
MBD3L5A6NJ08 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 KRT18P68-201ENST00000392293 1000 ntBASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L5A6NJ08 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 CYP21A1P-202ENST00000354927 1481 ntBASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD3L5A6NJ08 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.33■□□□□ 0.53
MBD3L5A6NJ08 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.33■□□□□ 0.53
MBD3L5A6NJ08 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MBD3L5A6NJ08 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.33■□□□□ 0.52
MBD3L5A6NJ08 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 KRT18P29-201ENST00000397031 1267 ntBASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD3L5A6NJ08 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms