Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC01546A6NGU7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC01546A6NGU7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LINC01546A6NGU7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01546A6NGU7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.73□□□□□ -0.05
LINC01546A6NGU7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01546A6NGU7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01546A6NGU7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 AP006587.3-201ENST00000525742 1516 ntBASIC14.72□□□□□ -0.05
LINC01546A6NGU7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01546A6NGU7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01546A6NGU7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01546A6NGU7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC01546A6NGU7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
LINC01546A6NGU7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC01546A6NGU7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01546A6NGU7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01546A6NGU7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC01546A6NGU7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC01546A6NGU7 LETM1P2-201ENST00000597330 2178 ntBASIC14.71□□□□□ -0.05
LINC01546A6NGU7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01546A6NGU7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
LINC01546A6NGU7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC01546A6NGU7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.71□□□□□ -0.06
LINC01546A6NGU7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC01546A6NGU7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC01546A6NGU7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 DUX4L18-201ENST00000553347 1267 ntBASIC14.7□□□□□ -0.06
LINC01546A6NGU7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 MIR4508-201ENST00000584178 70 ntBASIC14.7□□□□□ -0.06
LINC01546A6NGU7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 AC092720.2-201ENST00000602388 1665 ntBASIC14.7□□□□□ -0.06
LINC01546A6NGU7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01546A6NGU7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 AC241377.3-202ENST00000626088 1088 ntBASIC14.69□□□□□ -0.06
LINC01546A6NGU7 AC241585.3-202ENST00000628937 1088 ntBASIC14.69□□□□□ -0.06
LINC01546A6NGU7 AC245100.8-202ENST00000629247 1058 ntBASIC14.69□□□□□ -0.06
LINC01546A6NGU7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms