Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRDV1A0A1B0GX56 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRDV1A0A1B0GX56 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRDV1A0A1B0GX56 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRDV1A0A1B0GX56 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRDV1A0A1B0GX56 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRDV1A0A1B0GX56 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.27■□□□□ 0.51
TRDV1A0A1B0GX56 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRDV1A0A1B0GX56 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRDV1A0A1B0GX56 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
TRDV1A0A1B0GX56 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 MIR3181-201ENST00000578512 73 ntBASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRDV1A0A1B0GX56 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 AC010525.1-201ENST00000585559 441 ntBASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 AC099791.2-201ENST00000605725 427 ntBASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 MIR4787-201ENST00000607364 84 ntBASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRDV1A0A1B0GX56 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 AL033527.3-201ENST00000566366 1196 ntBASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 AC012354.3-201ENST00000623734 483 ntBASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRDV1A0A1B0GX56 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRDV1A0A1B0GX56 TCF3P1-201ENST00000423021 1937 ntBASIC18.23■□□□□ 0.51
TRDV1A0A1B0GX56 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRDV1A0A1B0GX56 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRDV1A0A1B0GX56 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
TRDV1A0A1B0GX56 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRDV1A0A1B0GX56 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRDV1A0A1B0GX56 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRDV1A0A1B0GX56 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.23■□□□□ 0.51
TRDV1A0A1B0GX56 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.23■□□□□ 0.51
TRDV1A0A1B0GX56 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRDV1A0A1B0GX56 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRDV1A0A1B0GX56 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.23■□□□□ 0.51
TRDV1A0A1B0GX56 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRDV1A0A1B0GX56 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms