Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 SERPINA7P1-201ENST00000443077 631 ntBASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM238LA0A1B0GVL6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM238LA0A1B0GVL6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM238LA0A1B0GVL6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM238LA0A1B0GVL6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM238LA0A1B0GVL6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
TMEM238LA0A1B0GVL6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM238LA0A1B0GVL6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM238LA0A1B0GVL6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM238LA0A1B0GVL6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TMEM238LA0A1B0GVL6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TMEM238LA0A1B0GVL6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM238LA0A1B0GVL6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM238LA0A1B0GVL6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM238LA0A1B0GVL6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC14.52□□□□□ -0.09
TMEM238LA0A1B0GVL6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM238LA0A1B0GVL6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM238LA0A1B0GVL6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM238LA0A1B0GVL6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM238LA0A1B0GVL6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TMEM238LA0A1B0GVL6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM238LA0A1B0GVL6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM238LA0A1B0GVL6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM238LA0A1B0GVL6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM238LA0A1B0GVL6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM238LA0A1B0GVL6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM238LA0A1B0GVL6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 AP005212.1-201ENST00000581547 1997 ntBASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 AC092053.1-201ENST00000605787 1936 ntBASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 MIR3960-201ENST00000583311 91 ntBASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 TCAF2P1-201ENST00000291129 2421 ntBASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM238LA0A1B0GVL6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM238LA0A1B0GVL6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM238LA0A1B0GVL6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.5□□□□□ -0.09
TMEM238LA0A1B0GVL6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM238LA0A1B0GVL6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TMEM238LA0A1B0GVL6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TMEM238LA0A1B0GVL6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms