Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-5A0A0J9YX44 AC005224.4-201ENST00000583262 1652 ntBASIC18.06■□□□□ 0.48
TRBV5-5A0A0J9YX44 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV5-5A0A0J9YX44 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.06■□□□□ 0.48
TRBV5-5A0A0J9YX44 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 AC131281.2-201ENST00000520478 145 ntBASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV5-5A0A0J9YX44 AC011484.1-201ENST00000377652 1995 ntBASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 IGHV3-19-201ENST00000521488 291 ntBASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV5-5A0A0J9YX44 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 MIR4767-201ENST00000582827 78 ntBASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 AC233992.3-201ENST00000607491 485 ntBASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 AC099778.1-201ENST00000568593 1911 ntBASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 PCDHAC2-203ENST00000615316 3011 ntBASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV5-5A0A0J9YX44 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV5-5A0A0J9YX44 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.02■□□□□ 0.48
TRBV5-5A0A0J9YX44 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV5-5A0A0J9YX44 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.02■□□□□ 0.48
TRBV5-5A0A0J9YX44 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV5-5A0A0J9YX44 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV5-5A0A0J9YX44 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV5-5A0A0J9YX44 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV5-5A0A0J9YX44 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.02■□□□□ 0.47
TRBV5-5A0A0J9YX44 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBV5-5A0A0J9YX44 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.02■□□□□ 0.47
TRBV5-5A0A0J9YX44 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBV5-5A0A0J9YX44 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
TRBV5-5A0A0J9YX44 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRBV5-5A0A0J9YX44 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.02■□□□□ 0.47
TRBV5-5A0A0J9YX44 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV5-5A0A0J9YX44 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBV5-5A0A0J9YX44 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV5-5A0A0J9YX44 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRBV5-5A0A0J9YX44 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.01■□□□□ 0.47
TRBV5-5A0A0J9YX44 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBV5-5A0A0J9YX44 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBV5-5A0A0J9YX44 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV5-5A0A0J9YX44 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBV5-5A0A0J9YX44 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV5-5A0A0J9YX44 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.01■□□□□ 0.47
TRBV5-5A0A0J9YX44 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV5-5A0A0J9YX44 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRBV5-5A0A0J9YX44 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV5-5A0A0J9YX44 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBV5-5A0A0J9YX44 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV5-5A0A0J9YX44 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV5-5A0A0J9YX44 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms