Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 GABARAPL3-202ENST00000624044 1851 ntBASIC15.44■□□□□ 0.06
TRAV21A0A0B4J279 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 IGHV3-19-201ENST00000521488 291 ntBASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV21A0A0B4J279 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 PLK5-205ENST00000642079 1969 ntBASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV21A0A0B4J279 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 UNC93B3-201ENST00000308076 687 ntBASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV21A0A0B4J279 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV21A0A0B4J279 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms