Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-1A0A0A6YYK1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-1A0A0A6YYK1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-1A0A0A6YYK1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-1A0A0A6YYK1 AC121338.2-201ENST00000622535 1744 ntBASIC15.77■□□□□ 0.12
TRAV8-1A0A0A6YYK1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-1A0A0A6YYK1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRAV8-1A0A0A6YYK1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV8-1A0A0A6YYK1 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.77■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-1A0A0A6YYK1 MIR3621-201ENST00000580529 85 ntBASIC15.77■□□□□ 0.12
TRAV8-1A0A0A6YYK1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV8-1A0A0A6YYK1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAV8-1A0A0A6YYK1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV8-1A0A0A6YYK1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV8-1A0A0A6YYK1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-1A0A0A6YYK1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-1A0A0A6YYK1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-1A0A0A6YYK1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-1A0A0A6YYK1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV8-1A0A0A6YYK1 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV8-1A0A0A6YYK1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRAV8-1A0A0A6YYK1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
TRAV8-1A0A0A6YYK1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-1A0A0A6YYK1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV8-1A0A0A6YYK1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-1A0A0A6YYK1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 SLC47A1P1-202ENST00000449666 945 ntBASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-1A0A0A6YYK1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 AC007225.1-201ENST00000566331 1836 ntBASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 SERBP1P1-201ENST00000396021 1160 ntBASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 AP005435.1-201ENST00000529293 1178 ntBASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 AC020907.5-201ENST00000624372 1936 ntBASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-1A0A0A6YYK1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 AL512631.2-201ENST00000604634 923 ntBASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 SYT6-210ENST00000641643 1587 ntBASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRAV8-1A0A0A6YYK1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms