Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 PADI3-201ENST00000375460 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 AC022107.1-201ENST00000624833 3094 ntBASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 GIT2-209ENST00000547815 2989 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 MELK-206ENST00000536329 2283 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 ARHGAP19-SLIT1-202ENST00000479633 1876 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 LINC02075-201ENST00000509950 1754 ntTSL 2 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 USP6NL-201ENST00000277575 4512 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 CPO-201ENST00000272852 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 FCER1G-202ENST00000367992 551 ntTSL 3 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 AC017104.1-203ENST00000454416 466 ntTSL 3 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 CTSLP4-201ENST00000454614 1002 ntBASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 IGKV1-12-201ENST00000480492 398 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 IGKV1-17-201ENST00000490686 378 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 AC008696.1-201ENST00000502593 615 ntBASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 RNU4ATAC5P-201ENST00000517226 126 ntBASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 LINC02454-202ENST00000541391 612 ntTSL 3 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 OAS1-211ENST00000553185 664 ntTSL 2 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 AC015853.1-201ENST00000574008 592 ntTSL 3 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 AC116914.1-201ENST00000575043 398 ntTSL 2 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 SHBG-218ENST00000576728 776 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 LINC01926-201ENST00000589476 478 ntTSL 2 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 DMRTC1-202ENST00000596389 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 MIR8078-201ENST00000619811 84 ntBASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 HNRNPCL2-202ENST00000621994 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 AC115618.3-201ENST00000623114 425 ntBASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 LINC01358-209ENST00000635072 1114 ntTSL 5 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 AC006030.1-201ENST00000451608 5059 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 EAF1-201ENST00000396842 4690 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 ZNF439-203ENST00000455282 2408 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 GPR107-203ENST00000372410 6991 ntTSL 5 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 KRT80-202ENST00000394815 3859 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 NFASC-207ENST00000404907 5447 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 MYOM2-201ENST00000262113 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 PTPRK-221ENST00000532331 5757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 DUSP6-201ENST00000279488 4400 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 AC233701.1-201ENST00000571452 4204 ntTSL 2 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 HK1-202ENST00000359426 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 STK31-202ENST00000355870 3326 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 ZNF383-207ENST00000589413 2268 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
SYCE2Q6PIF2 PAK3-204ENST00000372010 2606 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 VAPB-204ENST00000475243 7936 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 RBPJ-208ENST00000504907 1682 ntTSL 5 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 C8orf17-202ENST00000625034 2775 ntBASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 C16orf62-201ENST00000251143 3894 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 TCP10L-201ENST00000300258 2695 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 LINC02487-201ENST00000400831 2557 ntTSL 2 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 SRSF7-201ENST00000313117 2489 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 ITGAL-202ENST00000358164 4673 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 NMT2-201ENST00000378150 2457 ntTSL 2 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 EEF1A1P8-201ENST00000419025 1388 ntBASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 CACNB4-246ENST00000637309 7409 ntTSL 5 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 ADAMTSL1-201ENST00000276935 2906 ntTSL 5 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 LINC01266-201ENST00000420823 3948 ntTSL 2 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 AL117329.1-201ENST00000423737 1815 ntTSL 2 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 GHRH-201ENST00000237527 461 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 OR2S2-201ENST00000341959 1047 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 IL4-202ENST00000350025 414 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 TP53TG3C-201ENST00000360260 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 SNORA71A-201ENST00000364729 134 ntBASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 CNST-201ENST00000366511 645 ntTSL 3 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 ETNK2-201ENST00000367197 843 ntTSL 3 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 MIR503-201ENST00000385270 71 ntBASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 VAMP8-202ENST00000409760 805 ntTSL 3 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 LINC01703-201ENST00000412855 423 ntTSL 5 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 AC024559.1-201ENST00000426616 566 ntTSL 4 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 AC108868.1-201ENST00000431411 554 ntTSL 4 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 ESR1-208ENST00000443427 6357 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 Z69666.1-201ENST00000445733 801 ntTSL 3 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 MEMO1P1-201ENST00000452572 888 ntBASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 RN7SL484P-201ENST00000462651 202 ntBASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 RN7SL120P-201ENST00000463924 296 ntBASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 AC008770.1-204ENST00000489336 622 ntTSL 2 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 FAM107B-228ENST00000496330 697 ntAPPRIS P1 TSL 4 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 NR1I3-220ENST00000505005 985 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 RACK1-226ENST00000511900 922 ntTSL 5 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 CSNK1A1-206ENST00000515748 620 ntTSL 2 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 AC013643.1-201ENST00000518155 310 ntBASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 NR2F2-AS1-203ENST00000558929 574 ntTSL 5 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 NR2F2-AS1-207ENST00000560170 547 ntTSL 4 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 MOK-239ENST00000561150 568 ntTSL 4 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 DNM1P49-201ENST00000564895 474 ntBASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 TP53TG3-208ENST00000569420 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 TP53TG3B-205ENST00000569741 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 H3F3B-204ENST00000586607 551 ntAPPRIS P1 TSL 4 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 BRCA1-226ENST00000591534 1282 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 AC093107.2-201ENST00000603668 445 ntBASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 CCL4L2-213ENST00000617405 846 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 Metazoa_SRP.161-201ENST00000617435 256 ntBASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 AC009152.1-201ENST00000618290 556 ntBASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 MIR6732-201ENST00000619365 60 ntBASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 Metazoa_SRP.45-201ENST00000620896 299 ntBASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 AC010507.2-201ENST00000632795 676 ntBASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 AC245166.3-201ENST00000636897 257 ntBASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 AC233724.17-201ENST00000639073 597 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 RSRC1-201ENST00000295930 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 RSRC1-215ENST00000611884 1738 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 CSF2RB-201ENST00000262825 4087 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 SPECC1L-201ENST00000314328 6756 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 BRINP1-201ENST00000265922 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SYCE2Q6PIF2 RTN3-206ENST00000377819 4937 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms