Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HS3ST3A1Q9Y663 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HS3ST3A1Q9Y663 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HS3ST3A1Q9Y663 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HS3ST3A1Q9Y663 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HS3ST3A1Q9Y663 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.52■□□□□ 0.88
HS3ST3A1Q9Y663 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HS3ST3A1Q9Y663 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HS3ST3A1Q9Y663 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HS3ST3A1Q9Y663 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HS3ST3A1Q9Y663 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.52■□□□□ 0.88
HS3ST3A1Q9Y663 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.52■□□□□ 0.88
HS3ST3A1Q9Y663 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.52■□□□□ 0.88
HS3ST3A1Q9Y663 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HS3ST3A1Q9Y663 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.52■□□□□ 0.88
HS3ST3A1Q9Y663 KRT17P1-201ENST00000399211 1546 ntBASIC20.52■□□□□ 0.87
HS3ST3A1Q9Y663 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HS3ST3A1Q9Y663 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 ITM2C-210ENST00000620962 501 ntBASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HS3ST3A1Q9Y663 ECEL1P1-201ENST00000373592 1742 ntBASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 KRT18P68-201ENST00000392293 1000 ntBASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 AL589743.5-201ENST00000616611 1050 ntBASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.5■□□□□ 0.87
HS3ST3A1Q9Y663 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HS3ST3A1Q9Y663 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HS3ST3A1Q9Y663 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.49■□□□□ 0.87
HS3ST3A1Q9Y663 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HS3ST3A1Q9Y663 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HS3ST3A1Q9Y663 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HS3ST3A1Q9Y663 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HS3ST3A1Q9Y663 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HS3ST3A1Q9Y663 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.49■□□□□ 0.87
HS3ST3A1Q9Y663 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.49■□□□□ 0.87
HS3ST3A1Q9Y663 AC116050.2-201ENST00000612102 1779 ntBASIC20.49■□□□□ 0.87
HS3ST3A1Q9Y663 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HS3ST3A1Q9Y663 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms