Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 KRT18P68-201ENST00000392293 1000 ntBASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 AC007322.3-201ENST00000426526 701 ntBASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 AC060766.5-201ENST00000590539 871 ntBASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PCDHB7Q9Y5E2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.52■■□□□ 1.19
PCDHB7Q9Y5E2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB7Q9Y5E2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB7Q9Y5E2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHB7Q9Y5E2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB7Q9Y5E2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHB7Q9Y5E2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHB7Q9Y5E2 HLA-B-256ENST00000639848 1089 ntBASIC22.51■■□□□ 1.19
PCDHB7Q9Y5E2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB7Q9Y5E2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB7Q9Y5E2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PCDHB7Q9Y5E2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB7Q9Y5E2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB7Q9Y5E2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCDHB7Q9Y5E2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB7Q9Y5E2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB7Q9Y5E2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB7Q9Y5E2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB7Q9Y5E2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB7Q9Y5E2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB7Q9Y5E2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB7Q9Y5E2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDHB7Q9Y5E2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHB7Q9Y5E2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.49■■□□□ 1.19
PCDHB7Q9Y5E2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHB7Q9Y5E2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDHB7Q9Y5E2 C9orf163-202ENST00000624034 2573 ntBASIC22.49■■□□□ 1.19
PCDHB7Q9Y5E2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB7Q9Y5E2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB7Q9Y5E2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB7Q9Y5E2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB7Q9Y5E2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB7Q9Y5E2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PCDHB7Q9Y5E2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB7Q9Y5E2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB7Q9Y5E2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB7Q9Y5E2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB7Q9Y5E2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
PCDHB7Q9Y5E2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB7Q9Y5E2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB7Q9Y5E2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB7Q9Y5E2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB7Q9Y5E2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB7Q9Y5E2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB7Q9Y5E2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHB7Q9Y5E2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHB7Q9Y5E2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHB7Q9Y5E2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB7Q9Y5E2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PCDHB7Q9Y5E2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PCDHB7Q9Y5E2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB7Q9Y5E2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB7Q9Y5E2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB7Q9Y5E2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB7Q9Y5E2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB7Q9Y5E2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHB7Q9Y5E2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHB7Q9Y5E2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
PCDHB7Q9Y5E2 RPS2P4-201ENST00000476944 856 ntBASIC22.46■■□□□ 1.19
PCDHB7Q9Y5E2 UNC93B4-201ENST00000505679 747 ntBASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms